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Page B and Drouin G  (2012) Stronger purifying selection against gene conversions in a pathogenic Saccharomyces cerevisiae strain. Genome 55(12):835-43

Abstract: Gene conversions most often have no selective impact, but some are selectively disadvantageous whereas others are selectively advantageous. Although gene conversions have been extensively studied in yeasts, very little is known about their selective impact in pathological yeasts. Here, we used the GENECONV software to compare the characteristics of candidate gene conversions found in a pathogenic strain (YJM789) and a nonpathogenic strain (S288c) of Saccharomyces cerevisiae. Interestingly, the pathogenic strain has fewer gene conversions when compared with the nonpathogenic strain. Of the 123 conversions we identified, 27 were identical or similar between the two strains, 62 were specific to the S288c strain, and 34 were specific to the YJM789 strain. Identical and similar conversions likely represent conversions that are under similar levels of purifying selection in both strains. The lower number of gene conversions in most gene families of the pathogenic strain is likely the result of higher purifying selection in this strain. In contrast, the higher number of conversions found in the YRF1 helicase gene family of the pathogenic strain could represent an example of adaptive gene conversions involved in maintaining its telomeres.

Status: Published Type: Journal Article | Research Support, Non-U.S. Gov't PubMed ID: 23231602

Topics addressed in this paper

Number of different genes curated to this paper: 115

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
AAD10 AAD14 AAD15 AAD16 AAD3 AAD4 ADH1 ADH2 ALP1 COS1
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Topics Genes linked to topics (#11 - 20 )
COS2 COS4 COS5 COS6 COS7 COS8 ENA1 ENA2 ENA5 ENO1
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Topics Genes linked to topics (#21 - 30 )
ENO2 FCY2 FCY21 FCY22 FLO1 FLO10 FLO5 FLO9 GPX1 HMLALPHA2
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Topics Genes linked to topics (#31 - 40 )
HMRA2 HPF1 HSP150 HSP31 HSP32 HSP33 HXT1 HXT15 HXT17 HXT3
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Topics Genes linked to topics (#41 - 50 )
HXT4 HXT5 HXT6 HYR1 IDP2 IDP3 IMA1 IMA2 IMA3 IMD1
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Topics Genes linked to topics (#51 - 60 )
IMD2 IMD3 KAR2 LYP1 MAL12 MAL31 MAL32 MAL33 MPH2 MPH3
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Topics Genes linked to topics (#61 - 70 )
NRT1 PAU14 PEP1 PHO11 PHO12 PHO3 PHO5 PIR1 PIR3 PLB1
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Topics Genes linked to topics (#71 - 80 )
PLB2 RPL40A RPL40B SNO2 SNO3 SNZ3 SSA1 SSA2 SSA3 SSB1
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Topics Genes linked to topics (#81 - 90 )
SSB2 TDH2 TDH3 THI7 THI72 TPO2 TPO3 VTH1 YAR066W YCR102C
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Topics Genes linked to topics (#91 - 100 )
YEL075C YER189W YFL064C YFL066C YHL049C YHL050C YHR213W YHR214W YIL169C YIL177C
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Topics Genes linked to topics (#101 - 110 )
YIR043C YLL067C YLR460C YLR462W YNL134C YNR065C YPR196W YPR204W YRF1-1 YRF1-2
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Topics Genes linked to topics (#111 - 115 )
YRF1-3 YRF1-4 YRF1-5 YRF1-6 YRF1-7
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