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Eriksson PR, et al.  (2012) Regulation of histone gene expression in budding yeast. Genetics 191(1):7-20

Abstract: We discuss the regulation of the histone genes of the budding yeast Saccharomyces cerevisiae. These include genes encoding the major core histones (H3, H4, H2A, and H2B), histone H1 (HHO1), H2AZ (HTZ1), and centromeric H3 (CSE4). Histone production is regulated during the cell cycle because the cell must replicate both its DNA during S phase and its chromatin. Consequently, the histone genes are activated in late G1 to provide sufficient core histones to assemble the replicated genome into chromatin. The major core histone genes are subject to both positive and negative regulation. The primary control system is positive, mediated by the histone gene-specific transcription activator, Spt10, through the histone upstream activating sequences (UAS) elements, with help from the major G1/S-phase activators, SBF (Swi4 cell cycle box binding factor) and perhaps MBF (MluI cell cycle box binding factor). Spt10 binds specifically to the histone UAS elements and contains a putative histone acetyltransferase domain. The negative system involves negative regulatory elements in the histone promoters, the RSC chromatin-remodeling complex, various histone chaperones [the histone regulatory (HIR) complex, Asf1, and Rtt106], and putative sequence-specific factors. The SWI/SNF chromatin-remodeling complex links the positive and negative systems. We propose that the negative system is a damping system that modulates the amount of transcription activated by Spt10 and SBF. We hypothesize that the negative system mediates negative feedback on the histone genes by histone proteins through the level of saturation of histone chaperones with histone. Thus, the negative system could communicate the degree of nucleosome assembly during DNA replication and the need to shut down the activating system under replication-stress conditions. We also discuss post-transcriptional regulation and dosage compensation of the histone genes.

Status: Published Type: Journal Article | Research Support, N.I.H., Intramural | Review PubMed ID: 22555441

Topics addressed in this paper

Number of different genes curated to this paper: 57

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Topics Genes linked to topics (#1 - 10 )
ARP7 ARP9 ASF1 CSE4 HHF1 HHF2 HHO1 HHT1 HHT2 HIR1
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Topics Genes linked to topics (#11 - 20 )
HIR2 HIR3 HPC2 HTA1 HTA2 HTB1 HTB2 HTL1 HTZ1 LDB7
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Topics Genes linked to topics (#21 - 30 )
MBP1 NPL6 NRM1 PAP2 RAD53 RRP6 RSC1 RSC2 RSC3 RSC30
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Topics Genes linked to topics (#31 - 40 )
RSC4 RSC58 RSC6 RSC8 RSC9 RTT102 RTT106 RTT109 SFH1 SNF11
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Topics Genes linked to topics (#41 - 50 )
SNF12 SNF2 SNF5 SNF6 SPT10 SPT21 STB1 STH1 SWI1 SWI3
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Topics Genes linked to topics (#51 - 57 )
SWI4 SWI6 SWP82 TAF14 TRF5 WHI5 YTA7
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