Dikicioglu D, et al. (2012) Short- and long-term dynamic responses of the metabolic network and gene expression in yeast to a transient change in the nutrient environment. Mol Biosyst 8(6):1760-74
Abstract: Quantitative data on the dynamic changes in the transcriptome and the metabolome of yeast in response to an impulse-like perturbation in nutrient availability was integrated with the metabolic pathway information in order to elucidate the long-term dynamic re-organization of the cells. This study revealed that, in addition to the dynamic re-organization of the de novo biosynthetic pathways, salvage pathways were also re-organized in a time-dependent manner upon catabolite repression. The transcriptional and the metabolic responses observed for nitrogen catabolite repression were not as severe as those observed for carbon catabolite repression. Selective up- or down regulation of a single member of a paralogous gene pair during the response to the relaxation from nutritional limitation was identified indicating a differentiation of functions among paralogs. Our study highlighted the role of inosine accumulation and recycling in energy homeostasis and indicated possible bottlenecks in the process.
Type: Journal Article
PubMed ID: 22491778
Topics addressed in this paper
Number of different genes curated to this paper: 83
Jump to Summary Chart for:
To find other papers on a gene and topic, click on the colored ball in the appropriate box.
displays other papers with information about that topic for that gene.
displays other papers in SGD that are associated with that topic. The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
To go to the Locus page for a gene, click on the gene name.