Jakob S, et al. (2012) Interrelationships between Yeast Ribosomal Protein Assembly Events and Transient Ribosome Biogenesis Factors Interactions in Early Pre-Ribosomes. PLoS One 7(3):e32552
Abstract: Early steps of eukaryotic ribosome biogenesis require a large set of ribosome biogenesis factors which transiently interact with nascent rRNA precursors (pre-rRNA). Most likely, concomitant with that initial contacts between ribosomal proteins (r-proteins) and ribosome precursors (pre-ribosomes) are established which are converted into robust interactions between pre-rRNA and r-proteins during the course of ribosome maturation. Here we analysed the interrelationship between r-protein assembly events and the transient interactions of ribosome biogenesis factors with early pre-ribosomal intermediates termed 90S pre-ribosomes or small ribosomal subunit (SSU) processome in yeast cells. We observed that components of the SSU processome UTP-A and UTP-B sub-modules were recruited to early pre-ribosomes independently of all tested r-proteins. On the other hand, groups of SSU processome components were identified whose association with early pre-ribosomes was affected by specific r-protein assembly events in the head-platform interface of the SSU. One of these components, Noc4p, appeared to be itself required for robust incorporation of r-proteins into the SSU head domain. Altogether, the data reveal an emerging network of specific interrelationships between local r-protein assembly events and the functional interactions of SSU processome components with early pre-ribosomes. They point towards some of these components being transient primary pre-rRNA in vivo binders and towards a role for others in coordinating the assembly of major SSU domains.
| Status: Published | Type: Journal Article | PubMed ID: 22431976 |
Topics addressed in this paper
Number of different genes curated to this paper: 14
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| Topics | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| NOC4 | PWP2 | RPS11A | RPS11B | RPS13 | RPS14A | RPS14B | RPS15 | RPS22A | RPS22B | |
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| Non-Fungal Related Genes/Proteins | | | | | | | | | ||
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| Protein-Nucleic Acid Interactions | | | ||||||||
| Protein-protein Interactions | | | ||||||||
| Topics | Genes linked to topics (#11 - 14 ) | |||
|---|---|---|---|---|
| RPS5 | RPS9A | RPS9B | UTP4 | |
| Additional Literature | | | | |
| Cellular Location | | |||
| Mutants/Phenotypes | | | | |
| Non-Fungal Related Genes/Proteins | | | | |
| Primary Literature | | |||
| Protein-Nucleic Acid Interactions | | |||
| Protein-protein Interactions | | |||




