SGD Paper Help



Steffen KK, et al.  (2012) Ribosome deficiency protects against ER stress in Saccharomyces cerevisiae. Genetics 191(1):107-18

Abstract: In Saccharomyces cerevisiae, 59 of the 78 ribosomal proteins are encoded by duplicated genes that, in most cases, encode identical or very similar protein products. However, different sets of ribosomal protein genes have been identified in screens for various phenotypes, including life span, budding pattern, and drug sensitivities. Due to potential suppressors of growth rate defects among this set of strains in the ORF deletion collection, we regenerated the entire set of haploid ribosomal protein gene deletion strains in a clean genetic background. The new strains were used to create double deletions lacking both paralogs, allowing us to define a set of 14 nonessential ribosomal proteins. Replicative life-span analysis of new strains corresponding to ORF deletion collection strains that likely carried suppressors of growth defects identified 11 new yeast replicative aging genes. Treatment of the collection of ribosomal protein gene deletion strains with tunicamycin revealed a significant correlation between slow growth and resistance to ER stress that was recapitulated by reducing translation of wild-type yeast with cycloheximide. Interestingly, enhanced tunicamycin resistance in ribosomal protein gene deletion mutants was independent of the unfolded protein response transcription factor Hac1. These data support a model in which reduced translation is protective against ER stress by a mechanism distinct from the canonical ER stress response pathway and further add to the diverse yet specific phenotypes associated with ribosomal protein gene deletions.

Status: Published Type: Journal Article PubMed ID: 22377630

Topics addressed in this paper

Number of different genes curated to this paper: 59

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Topics Genes linked to topics (#1 - 10 )
HAC1 POP7 RPL10 RPL12A RPL12B RPL13B RPL15A RPL15B RPL16B RPL18A
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Fungal Related Genes/Proteins blue ball blue ball blue ball
Genetic Interactions blue ball blue ball blue ball
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Topics Genes linked to topics (#11 - 20 )
RPL18B RPL20A RPL20B RPL21A RPL22A RPL22B RPL24A RPL24B RPL25 RPL26A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball
Fungal Related Genes/Proteins blue ball
Genetic Interactions blue ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Primary Literature blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#21 - 30 )
RPL26B RPL28 RPL29 RPL2B RPL3 RPL30 RPL31A RPL31B RPL32 RPL34A
Additional Literature blue ball blue ball blue ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Primary Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#31 - 40 )
RPL34B RPL35A RPL38 RPL39 RPL41A RPL41B RPL42A RPL42B RPL5 RPL6A
Additional Literature blue ball blue ball blue ball
Fungal Related Genes/Proteins blue ball blue ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#41 - 50 )
RPP0 RPP1 RPP1A RPS12 RPS13 RPS15 RPS2 RPS20 RPS25A RPS25B
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Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#51 - 59 )
RPS28A RPS28B RPS3 RPS30A RPS30B RPS31 RPS5 RPS7A RPS7B
Additional Literature blue ball blue ball blue ball blue ball
Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball
Primary Literature blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball
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  • displays other papers in SGD that are associated with that topic.
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  • To go to the Locus page for a gene, click on the gene name.

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