Towns WL and Begley TJ (2012) Transfer RNA methytransferases and their corresponding modifications in budding yeast and humans: activities, predications, and potential roles in human health. DNA Cell Biol 31(4):434-54
Abstract: Throughout the kingdoms of life, transfer RNA (tRNA) undergoes over 100 enzyme-catalyzed, methyl-based modifications. Although a majority of the methylations are conserved from bacteria to mammals, the functions of a number of these modifications are unknown. Many of the proteins responsible for tRNA methylation, named tRNA methyltransferases (Trms), have been characterized in Saccharomyces cerevisiae. In contrast, only a few human Trms have been characterized. A BLAST search for human homologs of each S. cerevisiae Trm revealed a total of 34 human proteins matching our search criteria for an S. cerevisiae Trm homolog candidate. We have compiled a database cataloging basic information about each human and yeast Trm. Every S. cerevisiae Trm has at least one human homolog, while several Trms have multiple candidates. A search of cancer cell versus normal cell mRNA expression studies submitted to Oncomine found that 30 of the homolog genes display a significant change in mRNA expression levels in at least one data set. While 6 of the 34 human homolog candidates have confirmed tRNA methylation activity, the other candidates remain uncharacterized. We believe that our database will serve as a resource for investigating the role of human Trms in cellular stress signaling.
| Status: Published | Type: Journal Article | PubMed ID: 22191691 |
Topics addressed in this paper
Number of different genes curated to this paper: 20
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| Topics | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| ABP140 | GCD10 | GCD14 | NCL1 | PPM2 | TRM1 | TRM10 | TRM11 | TRM112 | TRM12 | |
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| Non-Fungal Related Genes/Proteins | | | | | | | | | | |
| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| TRM13 | TRM2 | TRM3 | TRM44 | TRM5 | TRM7 | TRM8 | TRM82 | TRM9 | TYW3 | |
| Additional Literature | | | | | | | | | | |
| Databases | | | | | | | | | | |
| Non-Fungal Related Genes/Proteins | | | | | | | | | | |




