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Jung PP, et al.  (2011) Ploidy influences cellular responses to gross chromosomal rearrangements in Saccharomyces cerevisiae. BMC Genomics 12(1):331

Abstract: ABSTRACT: BACKGROUND: Gross chromosomal rearrangements (GCRs) such as aneuploidy are key factors in genome evolution as well as being common features of human cancer. Their role in tumour initiation and progression has not yet been completely elucidated and the effects of additional chromosomes in cancer cells are still unknown. Most previous studies in which Saccharomyces cerevisiae has been used as a model for cancer cells have been carried out in the haploid context. To obtain new insights on the role of ploidy, the cellular effects of GCRs were compared between the haploid and diploid contexts. RESULTS: A total number of 21 haploid and diploid S. cerevisiae strains carrying various types of GCRs (aneuploidies, nonreciprocal translocations, segmental duplications and deletions) were studied with a view to determining the effects of ploidy on the cellular responses. Differences in colony and cell morphology as well as in the growth rates were observed between mutant and parental strains. These results suggest that cells are impaired physiologically in both contexts. We also investigated the variation in genomic expression in all the mutants. We observed that gene expression was significantly altered. The data obtained here clearly show that genes involved in energy metabolism, especially in the tricarboxylic acid cycle, are up-regulated in all these mutants. However, the genes involved in the composition of the ribosome or in RNA processing are down-regulated in diploids but up-regulated in haploids. Over-expression of genes involved in the regulation of the proteasome was found to occur only in haploid mutants. CONCLUSION: The present comparisons between the cellular responses of strains carrying GCRs in different ploidy contexts bring to light two main findings. First, GCRs induce a general stress response in all studied mutants, regardless of their ploidy. Secondly, the ploidy context plays a crucial role in maintaining the stoichiometric balance of the proteins: the translation rates decrease in diploid strains, whereas the excess protein synthesized is degraded in haploids by proteasome activity.

Status: Epub ahead of print Type: Journal Article PubMed ID: 21711526

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TWF1 TYS1 UBC7 UBP12 UBR1 UBR2 UBX2 UBX4 UFD1 UFO1
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#761 - 770 )
UGA1 UNG1 UPF3 UPS1 UPS2 URA2 URA5 USA1 USB1 UTP13
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Mutants/Phenotypes blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Techniques and Reagents blue ball

Topics Genes linked to topics (#771 - 780 )
UTP14 UTP15 UTP22 UTP8 VAC7 VAN1 VAS1 VBA1 VHT1 VMA21
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#781 - 790 )
VMA7 VOA1 VPS20 VPS34 VPS35 VPS62 VPS71 VPS9 VTA1 VTH2
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#791 - 800 )
WAR1 XDJ1 XKS1 XYL2 YAK1 YAP1 YAP1802 YCH1 YDJ1 YEF3
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#801 - 810 )
YEH2 YET2 YGL006W-A YGL007C-A YGR001C YGR011W YGR012W YGR015C YGR016W YGR017W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#811 - 820 )
YGR018C YGR021W YGR022C YGR025W YGR026W YGR027W-A YGR027W-B YGR035C YGR035W-A YGR038C-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#821 - 830 )
YGR038C-B YGR039W YGR042W YGR045C YGR050C YGR051C YGR053C YGR054W YGR064W YGR066C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#831 - 840 )
YGR067C YGR068W-A YGR069W YGR073C YGR079W YGR093W YGR107W YGR109W-A YGR109W-B YGR111W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#841 - 850 )
YGR114C YGR115C YGR117C YGR121W-A YGR122C-A YGR122W YGR125W YGR126W YGR127W YGR130C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#851 - 860 )
YGR137W YGR139W YGR146C-A YGR149W YGR151C YGR153W YGR160W YGR161C-C YGR161C-D YGR161W-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#861 - 870 )
YGR161W-B YGR161W-C YGR164W YGR168C YGR169C-A YGR174W-A YGR176W YGR182C YGR190C YGR201C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#871 - 880 )
YGR204C-A YGR210C YGR219W YGR226C YGR228W YGR237C YGR240C-A YGR242W YGR250C YGR259C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#881 - 890 )
YGR265W YGR266W YGR269W YGR270C-A YGR272C YGR273C YGR283C YGR290W YGR291C YGR293C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#891 - 900 )
YGR296C-A YGR296C-B YHB1 YIM1 YIM2 YIP1 YIP3 YJL132W YJL133C-A YJL135W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#901 - 910 )
YJL136W-A YJL144W YJL147C YJL150W YJL152W YJL156W-A YJL160C YJL163C YJL169W YJL171C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#911 - 920 )
YJL175W YJL181W YJL182C YJL193W YJL195C YJL197C-A YJL202C YJL206C YJL211C YJL213W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#921 - 930 )
YJL215C YJL218W YJL220W YJL222W-A YJL222W-B YJL225C YKE2 YKU80 YLR001C YLR012C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#931 - 940 )
YLR030W YLR031W YLR035C-A YLR036C YLR040C YLR041W YLR042C YLR046C YLR049C YLR050C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#941 - 950 )
YLR053C YLR063W YLR072W YLR076C YLR101C YLR108C YLR111W YLR112W YLR118C YLR120W-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#951 - 960 )
YLR122C YLR123C YLR124W YLR125W YLR126C YLR140W YLR146W-A YLR149C YLR149C-A YLR152C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#961 - 970 )
YLR154C-G YLR154C-H YLR154W-A YLR154W-B YLR154W-E YLR154W-F YLR156C-A YLR156W YLR157C-A YLR157C-B
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#971 - 980 )
YLR157C-C YLR157W-D YLR157W-E YLR159C-A YLR159W YLR161W YLR162W YLR163W-A YLR169W YLR171W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#981 - 990 )
YLR173W YLR177W YLR179C YLR184W YLR194C YLR198C YLR202C YLR211C YLR217W YLR222C-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#991 - 1000 )
YLR224W YLR225C YLR227W-A YLR227W-B YLR230W YLR232W YLR235C YLR236C YLR241W YMD8
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1001 - 1010 )
YML002W YML003W YML007C-A YML009C-A YML009W-B YML012C-A YML018C YML020W YML031C-A YML033W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1011 - 1020 )
YML034C-A YML037C YML039W YML040W YML045W YML045W-A YML047W-A YML053C YML054C-A YML057C-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1021 - 1030 )
YML079W YML082W YML083C YML084W YML089C YML090W YML094C-A YML096W YML099W-A YML100W-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1031 - 1040 )
YML101C-A YML108W YML116W-A YML119W YML122C YML131W YML6 YMR001C-A YMR007W YMR010W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1041 - 1050 )
YMR013C-A YMR013W-A YMR018W YMR027W YMR030W-A YMR031W-A YMR034C YMR045C YMR046C YMR046W-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1051 - 1060 )
YMR050C YMR051C YMR052C-A YMR057C YMR074C YMR075C-A YMR082C YMR084W YMR085W YMR086C-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1061 - 1070 )
YMR087W YMR090W YMR099C YMR102C YMR103C YMR105W-A YMR111C YMR114C YMR119W-A YMR122C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1071 - 1080 )
YMR122W-A YMR124W YMR130W YMR134W YMR135W-A YMR141C YMR141W-A YMR144W YMR147W YMR153C-A
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1081 - 1090 )
YMR155W YMR158C-A YMR158W-B YMR160W YMR166C YMR172C-A YMR173W-A YMR175W-A YMR178W YMR181C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1091 - 1100 )
YMR182W-A YNL010W YNL011C YNL013C YNL017C YNL018C YNL019C YNL022C YNL024C YNL028W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1101 - 1110 )
YNL033W YNL034W YNL035C YNL040W YNL042W-B YNL043C YNL046W YNL050C YNL054W-A YNL054W-B
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1111 - 1120 )
YNL057W YNL058C YOR1 YOX1 YPK2 YPP1 YPS1 YPS3 YPT7 YRF1-3
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#1121 - 1127 )
YTA12 YTA7 YUR1 ZDS2 ZPR1 ZRT2 ZUO1
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball

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