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Drummond SP, et al.  (2011) Diauxic shift-dependent relocalization of decapping activators Dhh1 and Pat1 to polysomal complexes. Nucleic Acids Res 39(17):7764-74

Abstract: Dhh1 and Pat1 in yeast are mRNA decapping activators/translational repressors thought to play key roles in the transition of mRNAs from translation to degradation. However, little is known about the physical and functional relationships between these proteins and the translation machinery. We describe a previously unknown type of diauxic shift-dependent modulation of the intracellular locations of Dhh1 and Pat1. Like the formation of P bodies, this phenomenon changes the spatial relationship between components involved in translation and mRNA degradation. We report significant spatial separation of Dhh1 and Pat1 from ribosomes in exponentially growing cells. Moreover, biochemical analyses reveal that these proteins are excluded from polysomal complexes in exponentially growing cells, indicating that they may not be associated with active states of the translation machinery. In contrast, under diauxic growth shift conditions, Dhh1 and Pat1 are found to co-localize with polysomal complexes. This work suggests that Dhh1 and Pat1 functions are modulated by a re-localization mechanism that involves eIF4A. Pull-down experiments reveal that the intracellular binding partners of Dhh1 and Pat1 change as cells undergo the diauxic growth shift. This reveals a new dimension to the relationship between translation activity and interactions between mRNA, the translation machinery and decapping activator proteins.

Status: Published Type: Journal Article PubMed ID: 21712243

Topics addressed in this paper

Number of different genes curated to this paper: 20

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Topics Genes linked to topics (#1 - 10 )
DED1 DHH1 PAT1 RPL16A RPL16B RPL25 RPL26A RPL26B RPL35A RPL35B
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Cellular Location blue ball blue ball blue ball
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Topics Genes linked to topics (#11 - 20 )
RPL9B RPO21 RPS19A RPS19B RPS2 RPS3 TEF1 TEF2 TIF1 TIF2
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Alias blue ball
Cellular Location blue ball
Genetic Interactions blue ball blue ball
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Primary Literature blue ball blue ball
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