SGD Paper Help



Wimalarathna R, et al.  (2011) Transcriptional control of genes involved in yeast phospholipid biosynthesis. J Microbiol 49(2):265-73

Abstract: Phospholipid biosynthetic genes encode enzymes responsible for phospholipid biosynthesis. They are coordin-ately regulated by the availability of phospholipid precursors through the inositol-sensitive upstream activating sequence (UAS( INO )). However, not all phospholipid genes are UAS( INO )-containing genes and not all UAS( INO )-containing genes have the same response to the phospholipid precursors. Therefore, the transcriptional regulation of phospholipid genes in response to the availability of phospholipid precursors is still unclear. Here, 22 out of 47 phospholipid biosynthetic genes were identified as UAS( INO )-containing genes, including EKI1, EPT1, INM1, IPK2, KCS1, PAH1, and PIK1 which have never been reported before. We also showed, using qRT-PCR technique, that 12 UAS( INO )-containing genes are down-regulated by 100 muM inositol in the wild type cells and up-regulated by 100 muM inositol in the ino2Delta cells. Therefore, it is possible that these genes are transcriptionally regulated by the UAS( INO ) through the negative response of Ino2p to inositol. One other UAS( INO )-containing gene might be regulated by the positive response of Ino2p to 100 muM inositol. Surprisingly, we found 9 UAS( INO )-containing genes are not dependent on the response of Ino2p to 100 muM inositol, indicating that they may be regulated by other pathway. Furthermore, we identified 9 and 3 non-UAS( INO )-containing genes that are possibly regulated by the negative and positive response of Ino2p to 100 muM inositol, respectively. Therefore, these observations provide insight into the understanding of the co-regulated phospholipid biosynthetic genes expression.

Status: Published Type: Journal Article PubMed ID: 21538248

Topics addressed in this paper

Number of different genes curated to this paper: 22

Jump to Summary Chart for:

  • To find other papers on a gene and topic, click on the colored ball in the appropriate box.
  • displays other papers with information about that topic for that gene.
  • displays other papers in SGD that are associated with that topic.
    The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
  • To go to the Locus page for a gene, click on the gene name.
Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
CDS1 CHO1 CHO2 CKI1 CPT1 EKI1 EPT1 ERG20 FAS1 FAS2
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
DNA/RNA Sequence Features blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Genomic expression study yg ball
Omics yg ball
Regulation of blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Transcription blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#11 - 20 )
INM1 INO1 INO2 ITR1 KCS1 OLE1 OPI3 PAH1 PIK1 PIS1
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
DNA/RNA Sequence Features blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Mutants/Phenotypes blue ball
Regulation of blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Regulatory Role blue ball
Strains/Constructs blue ball
Transcription blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#21 - 22 )
PSD1 PSD2
Additional Literature blue ball blue ball
DNA/RNA Sequence Features blue ball blue ball
Regulation of blue ball blue ball
Transcription blue ball blue ball

Author Searches

To find contact information or other publications by the authors of this paper, follow these three steps:
  1. (1) Choose an author,
  2. (2) Choose a search parameter,
  3. (3) Click to implement