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Dziedzic SA and Caplan AB  (2011) Identification of autophagy genes participating in zinc-induced necrotic cell death in Saccharomyces cerevisiae. Autophagy 7(5):490-500

Abstract: Eukaryotes use a common set of genes to perform two mechanistically similar autophagic processes. Bulk autophagy harvests proteins nonselectively and reuses their constitutents when nutrients are scarce. In contrast, different forms of selective autophagy target protein aggregates or damaged organelles that threaten to interfere with growth. Yeast uses one form of selective autophagy, called cytoplasm-to-vacuole targeting (Cvt), to engulf two vacuolar enzymes in Cvt vesicles ("CVT-somes") within which they are transported to vacuoles for maturation. While both are dispensable normally, bulk and selective autophagy help sustain life under stressful conditions. Consistent with this view, knocking out several genes participating in Cvt and specialized autophagic pathways heightened the sensitivity of Saccharomyces cerevisiae to inhibitory levels of Zn(2+). The loss of other autophagic genes, and genes responsible for apoptotic cell death, had no such effect. Unexpectedly, the loss of members of a third set of autophagy genes heightened cellular resistance to zinc as if they encoded proteins that actively contributed to zinc-induced cell death. Further studies showed that both sensitive and resistant strains accumulated similar amounts of H2O2 during zinc treatments, but that more sensitive strains showed signs of necrosis sooner. Although zinc lethality depended on autophagic proteins, studies with several reporter genes failed to reveal increased autophagic activity. In fact, microscopy analysis indicated that Zn(2+) partially inhibited fusion of Cvt vesicles with vacuoles. Further studies into how the loss of autophagic processes suppressed necrosis in yeast might reveal whether a similar process could occur in plants and animals.

Status: Published Type: Journal Article PubMed ID: 21317551

Topics addressed in this paper

Number of different genes curated to this paper: 71

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Topics Genes linked to topics (#1 - 10 )
AIF1 ALD6 APE1 ATG1 ATG10 ATG11 ATG12 ATG13 ATG14 ATG15
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Genetic Interactions blue ball
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Topics Genes linked to topics (#11 - 20 )
ATG16 ATG17 ATG18 ATG19 ATG2 ATG20 ATG21 ATG22 ATG23 ATG26
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#21 - 30 )
ATG27 ATG29 ATG3 ATG31 ATG32 ATG33 ATG34 ATG4 ATG5 ATG7
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Primary Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#31 - 40 )
ATG8 ATG9 BRE5 BSD2 CCZ1 COQ3 DSK2 GSY1 GTR1 GTR2
Cellular Location blue ball
Genetic Interactions blue ball
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Topics Genes linked to topics (#41 - 50 )
LAP3 MCA1 MON1 NUC1 NVJ1 PEP3 PEP4 PEX14 PEX3 PEX6
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Topics Genes linked to topics (#51 - 60 )
RAS1 RAS2 RIM15 SCH9 SLM4 SNF1 SNX4 SVF1 TLG2 TOR1
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#61 - 70 )
TUL1 UBP3 UTH1 VAC8 VID24 VPS15 VPS30 VPS38 VPS45 VTC4
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Topics Genes linked to topics (#71 )
ZRC1
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Primary Literature blue ball

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