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Zhang CT and Wang J  (2000) Recognition of protein coding genes in the yeast genome at better than 95% accuracy based on the Z curve. Nucleic Acids Res 28(14):2804-14

Abstract: The Z curve is a three-dimensional space curve constituting the unique representation of a given DNA sequence in the sense that each can be uniquely reconstructed from the other. Based on the Z curve, a new protein coding gene-finding algorithm specific for the yeast genome at better than 95% accuracy has been proposed. Six cross-validation tests were performed to confirm the above accuracy. Using the new algorithm, the number of protein coding genes in the yeast genome is re-estimated. The estimate is based on the assumption that the unknown genes have similar statistical properties to the known genes. It is found that the number of protein coding genes in the 16 yeast chromosomes is 0.5 or YZ < 0.5, respectively. The YZ scores for all the ORFs annotated in the MIPS database have been calculated and are available on request by sending e-mail to the corresponding author.

Status: Published Type: Journal Article | Research Support, Non-U.S. Gov't PubMed ID: 10908339

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YML012C-A YML031C-A YML034C-A YML047W-A YML057C-A YML084W YML089C YML090W YML094C-A YML099W-A
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YMR326C YNL013C YNL017C YNL028W YNL089C YNL109W YNL114C YNL120C YNL122C YNL143C
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YNL337W YNL338W YNR005C YNR025C YNR062C YNR077C YOL013W-A YOL035C YOL037C YOL038C-A
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YOR277C YOR282W YOR292C YOR300W YOR309C YOR314W YOR325W YOR331C YOR333C YOR343C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Computational analysis blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#721 - 730 )
YOR345C YOR364W YOR365C YOR376W YOR379C YOR392W YPC1 YPL025C YPL034W YPL035C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Computational analysis blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#731 - 740 )
YPL041C YPL044C YPL073C YPL102C YPL114W YPL162C YPL185W YPL205C YPL238C YPL251W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Computational analysis blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#741 - 750 )
YPL261C YPL264C YPR012W YPR014C YPR039W YPR050C YPR053C YPR064W YPR071W YPR077C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Computational analysis blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#751 - 760 )
YPR092W YPR096C YPR099C YPR114W YPR126C YPR130C YPR136C YPR142C YPR146C YPR150W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Computational analysis blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#761 - 766 )
YPR153W YPR170C YPR170W-A YPR177C YPR195C YPR203W
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball
Computational analysis blue ball blue ball blue ball blue ball blue ball blue ball

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