Smith DM, et al. (2007) Docking of the proteasomal ATPases' carboxyl termini in the 20S proteasome's alpha ring opens the gate for substrate entry. Mol Cell 27(5):731-44
Abstract: The 20S proteasome functions in protein degradation in eukaryotes together with the 19S ATPases or in archaea with the homologous PAN ATPase complex. These ATPases contain a conserved C-terminal hydrophobic-tyrosine-X motif (HbYX). We show that these residues are essential for PAN to associate with the 20S and open its gated channel for substrate entry. Upon ATP binding, these C-terminal residues bind to pockets between the 20S's alpha subunits. Seven-residue or longer peptides from PAN's C terminus containing the HbYX motif also bind to these sites and induce gate opening in the 20S. Gate opening could be induced by C-terminal peptides from the 19S ATPase subunits, Rpt2, and Rpt5, but not by ones from PA28/26, which lack the HbYX motif and cause gate opening by distinct mechanisms. C-terminal residues in the 19S ATPases were also shown to be critical for gating and stability of 26S proteasomes. Thus, the C termini of the proteasomal ATPases function like a "key in a lock" to induce gate opening and allow substrate entry.
| Status: Published | Type: Journal Article | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | PubMed ID: 17803938 |
Topics addressed in this paper
Number of different genes curated to this paper: 44
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| Topics | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CIC1 | DOA4 | ECM29 | HUL5 | PRE1 | PRE10 | PRE2 | PRE3 | PRE4 | PRE5 | |
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| Protein Physical Properties | | | | | | | | | | |
| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| PRE6 | PRE7 | PRE8 | PRE9 | PUP1 | PUP2 | PUP3 | RAD23 | RPN1 | RPN10 | |
| Additional Literature | | | | | | | | | | |
| Protein Physical Properties | | | | | | | | | | |
| Topics | Genes linked to topics (#21 - 30 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPN11 | RPN12 | RPN13 | RPN14 | RPN2 | RPN3 | RPN5 | RPN6 | RPN7 | RPN8 | |
| Additional Literature | | | | | | | | | | |
| Protein Physical Properties | | | | | | | | | | |
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| Topics | Genes linked to topics (#31 - 40 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPN9 | RPT1 | RPT2 | RPT3 | RPT4 | RPT5 | RPT6 | SCL1 | SEM1 | UBC1 | |
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| Non-Fungal Related Genes/Proteins | | | | | | |||||
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| Protein Sequence Features | | | | | | |||||
| Strains/Constructs | | | | | | |||||
| Substrates/Ligands/Cofactors | | | | | | |||||
| Topics | Genes linked to topics (#41 - 44 ) | |||
|---|---|---|---|---|
| UBC4 | UBC5 | UBP6 | UMP1 | |
| Additional Literature | | | | |
| Protein Physical Properties | | | | |





