Ferreira-Cerca S, et al. (2007) Analysis of the in vivo assembly pathway of eukaryotic 40S ribosomal proteins. Mol Cell 28(3):446-57
Abstract: In eukaryotes, in vivo formation of the two ribosomal subunits from four ribosomal RNAs (rRNAs) and approximately 80 ribosomal proteins (r-proteins) involves more than 150 nonribosomal proteins and around 100 small noncoding RNAs. It is temporally and spatially organized within different cellular compartments: the nucleolus, the nucleoplasm, and the cytoplasm. Here, we present a way to analyze how eukaryotic r-proteins of the small ribosomal subunit (SSU) assemble in vivo with rRNA. Our results show that key aspects of the assembly of eukaryotic r-proteins into distinct structural parts of the SSU are similar to the in vitro assembly pathway of their prokaryotic counterparts. We observe that the establishment of a stable assembly intermediate of the eukaryotic SSU body, but not of the SSU head, is closely linked to early rRNA processing events. The formation of assembly intermediates of the head controls efficient nuclear export of the SSU and cytoplasmic pre-rRNA maturation steps.
| Status: Published | Type: Journal Article | PubMed ID: 17996708 |
Topics addressed in this paper
Number of different genes curated to this paper: 34
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| Topics | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRM1 | NOC4 | RDN18-1 | RDN18-2 | RDN37-1 | RDN37-2 | RPS0A | RPS0B | RPS10A | RPS11A | |
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| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPS11B | RPS13 | RPS14A | RPS14B | RPS15 | RPS16A | RPS16B | RPS17A | RPS19A | RPS1A | |
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| Topics | Genes linked to topics (#21 - 30 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPS2 | RPS20 | RPS24A | RPS26A | RPS27B | RPS28B | RPS29A | RPS29B | RPS3 | RPS31 | |
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| Protein-Nucleic Acid Interactions | | | | | | | | | | |
| Protein/Nucleic Acid Structure | | | | | | |||||
| Strains/Constructs | | | | | | | | | | |
| Techniques and Reagents | | | | | | | | | | |
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Genes linked to topics (#31 - 34 ) | |||
|---|---|---|---|---|
| RPS5 | RPS6A | RPS9A | RPS9B | |
| Additional Literature | | |||
| Function/Process | | |||
| Mutants/Phenotypes | | |||
| Primary Literature | | | | |
| Protein-Nucleic Acid Interactions | | | | |
| Protein/Nucleic Acid Structure | | | | |
| Strains/Constructs | | | | |
| Techniques and Reagents | | | | |




