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Massoni A, et al.  (2009) Exploring the dynamics of the yeast proteome by means of 2-DE. Proteomics 9(20):4674-85

Abstract: In this study we combined pulse chase experiments and 2-DE in order to investigate how newly synthesized proteins are processed or modified to yield a functional yeast proteome. This approach allowed us to follow the fate of 560 native yeast proteins from the time they were synthesized up to several hours later. Among these, 81 were observed to vary during the chase, either increasing or decreasing. In addition, 60 were found to be modified immediately after their synthesis. Taking advantage of protein identifications, we characterized a wide variety of post-translational events responsible for these changes, such as protein turnover, protein maturation and different types of PTMs. These events operate over very different time scales, ranging from the brief period required for co-translational modifications to one generation time or more. In light of these results, the functional proteome of exponentially growing cells appears to be the product of a permanent remodelling process that modifies native proteins far beyond the time they have been synthesized. This study also allowed us to obtain information on the half-lives of 260 abundant yeast proteins.

Status: Published Type: Journal Article PubMed ID: 19795422

Topics addressed in this paper

Number of different genes curated to this paper: 31

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
ADH5 APE1 ARG5,6 CIT2 DPH1 DPS1 EFT1 GLY1 GSP1 HYP2
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Large-scale protein modification yg ball
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Omics yg ball
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Topics Genes linked to topics (#11 - 20 )
KRS1 LEU1 LYS20 LYS21 MAP2 PDA1 PDC1 PRE2 PRE3 PRE4
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Protein Processing/Modification/Regulation blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#21 - 30 )
PRE7 PUP1 RIP1 RNR1 SHP1 SRX1 SSA2 SSC1 TDH2 TSA1
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Mutants/Phenotypes blue ball
Protein Processing/Modification/Regulation blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#31 )
YMR178W
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Protein Processing/Modification/Regulation blue ball

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