Taylor DJ, et al. (2009) Comprehensive molecular structure of the eukaryotic ribosome. Structure 17(12):1591-604
Abstract: Despite the emergence of a large number of X-ray crystallographic models of the bacterial 70S ribosome over the past decade, an accurate atomic model of the eukaryotic 80S ribosome is still not available. Eukaryotic ribosomes possess more ribosomal proteins and ribosomal RNA than do bacterial ribosomes, which are implicated in extraribosomal functions in the eukaryotic cells. By combining cryo-EM with RNA and protein homology modeling, we obtained an atomic model of the yeast 80S ribosome complete with all ribosomal RNA expansion segments and all ribosomal proteins for which a structural homolog can be identified. Mutation or deletion of 80S ribosomal proteins can abrogate maturation of the ribosome, leading to several human diseases. We have localized one such protein unique to eukaryotes, rpS19e, whose mutations are associated with Diamond-Blackfan anemia in humans. Additionally, we characterize crucial interactions between the dynamic stalk base of the ribosome with eukaryotic elongation factor 2.
| Status: Published | Type: Journal Article | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | PubMed ID: 20004163 |
Topics addressed in this paper
Number of different genes curated to this paper: 134
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| Topics | Topics not linked to Genes | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ASC1 | RPL10 | RPL11A | RPL11B | RPL12A | RPL12B | RPL13A | RPL13B | RPL14A | RPL14B | ||
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| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPL15A | RPL15B | RPL16A | RPL16B | RPL17A | RPL17B | RPL18A | RPL18B | RPL19A | RPL19B | |
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| Topics | Genes linked to topics (#21 - 30 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPL1A | RPL1B | RPL20A | RPL20B | RPL21A | RPL21B | RPL22A | RPL22B | RPL23A | RPL23B | |
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| Protein/Nucleic Acid Structure | | | | | | | | | | |
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| Topics | Genes linked to topics (#31 - 40 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPL24A | RPL24B | RPL25 | RPL26A | RPL26B | RPL27A | RPL27B | RPL28 | RPL29 | RPL2A | |
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| Topics | Genes linked to topics (#41 - 50 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPL2B | RPL3 | RPL30 | RPL31A | RPL31B | RPL32 | RPL33A | RPL33B | RPL34A | RPL34B | |
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| Topics | Genes linked to topics (#51 - 60 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPL35A | RPL35B | RPL36A | RPL36B | RPL37A | RPL37B | RPL38 | RPL39 | RPL40A | RPL40B | |
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| Computational analysis | | | | | | | | | | |
| Non-Fungal Related Genes/Proteins | | | | | | | | | | |
| Protein/Nucleic Acid Structure | | | | | | | | | | |
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| Topics | Genes linked to topics (#61 - 70 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPL41A | RPL41B | RPL42A | RPL42B | RPL43A | RPL43B | RPL4A | RPL4B | RPL5 | RPL6A | |
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| Topics | Genes linked to topics (#71 - 80 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPL6B | RPL7A | RPL7B | RPL8A | RPL8B | RPL9A | RPL9B | RPP0 | RPS0A | RPS0B | |
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| Protein/Nucleic Acid Structure | | | | | | | | | | |
| Topics | Genes linked to topics (#81 - 90 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPS10A | RPS10B | RPS11A | RPS11B | RPS12 | RPS13 | RPS14A | RPS14B | RPS15 | RPS16A | |
| Additional Literature | | | | | | | | | | |
| Computational analysis | | | | | | | | | | |
| Non-Fungal Related Genes/Proteins | | | | | | | | | | |
| Protein/Nucleic Acid Structure | | | | | | | | | | |
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
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The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
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| Topics | Genes linked to topics (#91 - 100 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPS16B | RPS17A | RPS17B | RPS18A | RPS18B | RPS19A | RPS19B | RPS1A | RPS1B | RPS2 | |
| Additional Literature | | | | | | | | | | |
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| Non-Fungal Related Genes/Proteins | | | | | | | | | | |
| Protein/Nucleic Acid Structure | | | | | | | | | | |
| Topics | Genes linked to topics (#101 - 110 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPS20 | RPS21A | RPS21B | RPS22A | RPS22B | RPS23A | RPS23B | RPS24A | RPS24B | RPS25A | |
| Additional Literature | | | | | | | | | | |
| Computational analysis | | | | | | | | | | |
| Non-Fungal Related Genes/Proteins | | | | | | | | | | |
| Protein/Nucleic Acid Structure | | | | | | | | | | |
| Topics | Genes linked to topics (#111 - 120 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPS25B | RPS26A | RPS26B | RPS27A | RPS27B | RPS28A | RPS28B | RPS29A | RPS29B | RPS3 | |
| Additional Literature | | | | | | | | | | |
| Computational analysis | | | | | | | | | | |
| Non-Fungal Related Genes/Proteins | | | | | | | | | | |
| Protein/Nucleic Acid Structure | | | | | | | | | | |
| Topics | Genes linked to topics (#121 - 130 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RPS30A | RPS30B | RPS31 | RPS4A | RPS4B | RPS5 | RPS6A | RPS6B | RPS7A | RPS7B | |
| Additional Literature | | | | | | | | | | |
| Computational analysis | | | | | | | | | | |
| Non-Fungal Related Genes/Proteins | | | | | | | | | | |
| Protein/Nucleic Acid Structure | | | | | | | | | | |
| Topics | Genes linked to topics (#131 - 134 ) | |||
|---|---|---|---|---|
| RPS8A | RPS8B | RPS9A | RPS9B | |
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