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Shishkin AA, et al.  (2009) Large-scale expansions of Friedreich's ataxia GAA repeats in yeast. Mol Cell 35(1):82-92

Abstract: Large-scale expansions of DNA repeats are implicated in numerous hereditary disorders in humans. We describe a yeast experimental system to analyze large-scale expansions of triplet GAA repeats responsible for the human disease Friedreich's ataxia. When GAA repeats were placed into an intron of the chimeric URA3 gene, their expansions caused gene inactivation, which was detected on the selective media. We found that the rates of expansions of GAA repeats increased exponentially with their lengths. These rates were only mildly dependent on the repeat's orientation within the replicon, whereas the repeat-mediated replication fork stalling was exquisitely orientation dependent. Expansion rates were significantly elevated upon inactivation of the replication fork stabilizers, Tof1 and Csm3, but decreased in the knockouts of postreplication DNA repair proteins, Rad6 and Rad5, and the DNA helicase Sgs1. We propose a model for large-scale repeat expansions based on template switching during replication fork progression through repetitive DNA.

Status: Published Type: Journal Article | Research Support, N.I.H., Extramural PubMed ID: 19595718

Topics addressed in this paper

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
CSM3 MSH2 PIF1 RAD5 RAD50 RAD52 RAD6 RRM3 SGS1 SRS2
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Regulatory Role blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#11 )
TOF1
Additional Literature blue ball
Mutants/Phenotypes blue ball
Regulatory Role blue ball
Strains/Constructs blue ball

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