Copic A, et al. (2009) Genomewide analysis reveals novel pathways affecting endoplasmic reticulum homeostasis, protein modification and quality control. Genetics 182(3):757-69
Abstract: To gain new mechanistic insight into ER homeostasis and the biogenesis of secretory proteins, we screened a genome-wide collection of yeast mutants for defective intracellular retention of the ER chaperone, Kar2p. We identified 87 Kar2p-secreting strains, including a number of known components in secretory protein modification and sorting. Further characterization of the 73 non-essential Kar2p retention mutants revealed roles for a number of novel gene products in protein glycosylation, GPI-anchor attachment, ER quality control, and retrieval of escaped ER residents. A subset of these mutants, required for ER retrieval, included the GET complex and two novel proteins that likely similarly function in membrane insertion of tail-anchored proteins. Finally, the variant histone, Htz1p, and its acetylation state seem to play an important role in maintaining ER retrieval pathways, suggesting a surprising link between chromatin remodeling and ER homeostasis.
| Status: Published | Type: Journal Article | PubMed ID: 19433630 |
Topics addressed in this paper
Number of different genes curated to this paper: 28
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Topics not linked to Genes | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ALG3 | ARV1 | BST1 | CSF1 | EMP24 | ENV10 | EOS1 | ERP1 | ERP2 | ERV25 | ||
| Additional Literature | | ||||||||||
| Function/Process | | | |||||||||
| Genetic Interactions | | | | | |||||||
| Large-scale phenotype analysis |
| ||||||||||
| Mutants/Phenotypes | | | | | |||||||
| Omics |
| ||||||||||
| Primary Literature | | | | | | | | | | ||
| Strains/Constructs | | | | | |||||||
| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| FAT1 | GUP1 | HAC1 | HTZ1 | ICS3 | KAR2 | LHS1 | MDY2 | MNN11 | MRPL16 | |
| Additional Literature | | | | | ||||||
| Cellular Location | | |||||||||
| Function/Process | | | ||||||||
| Genetic Interactions | | | | | ||||||
| Mutants/Phenotypes | | | | | ||||||
| Primary Literature | | | | | | | ||||
| Protein Processing/Modification/Regulation | | |||||||||
| Strains/Constructs | | | | | ||||||
| Topics | Genes linked to topics (#21 - 28 ) | |||||||
|---|---|---|---|---|---|---|---|---|
| NEM1 | OST3 | PER1 | PHO88 | SEC22 | TED1 | UBX2 | YBL083C | |
| Additional Literature | | |||||||
| Function/Process | | |||||||
| Genetic Interactions | | | ||||||
| Mutants/Phenotypes | | | ||||||
| Primary Literature | | | | | | | | |
| Strains/Constructs | | | ||||||





