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Kar S, et al.  (2009) Exploring the roles of noise in the eukaryotic cell cycle. Proc Natl Acad Sci U S A 106(16):6471-6

Abstract: The DNA replication-division cycle of eukaryotic cells is controlled by a complex network of regulatory proteins, called cyclin-dependent kinases, and their activators and inhibitors. Although comprehensive and accurate deterministic models of the control system are available for yeast cells, reliable stochastic simulations have not been carried out because the full reaction network has yet to be expressed in terms of elementary reaction steps. As a first step in this direction, we present a simplified version of the control system that is suitable for exact stochastic simulation of intrinsic noise caused by molecular fluctuations and extrinsic noise because of unequal division. The model is consistent with many characteristic features of noisy cell cycle progression in yeast populations, including the observation that mRNAs are present in very low abundance ( approximately 1 mRNA molecule per cell for each expressed gene). For the control system to operate reliably at such low mRNA levels, some specific mRNAs in our model must have very short half-lives (<1 min). If these mRNA molecules are longer-lived (perhaps 2 min), then the intrinsic noise in our simulations is too large, and there must be some additional noise suppression mechanisms at work in cells.

Status: Published Type: Journal Article PubMed ID: 19246388

Topics addressed in this paper

Number of different genes curated to this paper: 14

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
APC2 APC4 APC5 APC9 CDC14 CDC16 CDC20 CDC23 CDC26 CDC27
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Cell Cycle Phase Involved blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#11 - 14 )
CDC28 CDH1 CLB1 MND2
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Cell Cycle Phase Involved blue ball blue ball blue ball blue ball
Computational analysis blue ball blue ball blue ball blue ball

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