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Yoshikawa K, et al.  (2009) Comprehensive phenotypic analysis for identification of genes affecting growth under ethanol stress in Saccharomyces cerevisiae. FEMS Yeast Res 9(1):32-44

Abstract: Abstract We quantified the growth behavior of all available single gene deletion strains of budding yeast under ethanol stress. Genome-wide analyses enabled the extraction of the genes and determination of the functional categories required for growth under this condition. Statistical analyses revealed that the growth of 446 deletion strains under stress induced by 8% ethanol was defective. We classified these deleted genes into known functional categories, and found that many were important for growth under ethanol stress including several categories that have not been characterized, such as peroxisome. We also performed genome-wide screening under osmotic stress and identified 329 osmotic-sensitive strains. We excluded these strains from the 446 ethanol-sensitive strains to extract the genes whose deletion caused sensitivity to ethanol-specific (359 genes), osmotic-specific (242 genes), and both stresses (87 genes). We also extracted the functional categories that are specifically important for growth under ethanol stress. The genes and functional categories identified in the analysis might provide clues to improving ethanol stress tolerance among yeast cells.

Status: Published Type: Journal Article PubMed ID: 19054128

Topics addressed in this paper

Number of different genes curated to this paper: 94

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ALD6 ARO1 ARO2 ARO7 COQ10 COQ5 COQ9 COX11 COX12 COX14
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Topics Genes linked to topics (#11 - 20 )
COX16 COX18 COX23 COX7 COX9 CYB5 DDI3 DID4 ERG2 ERG3
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Topics Genes linked to topics (#21 - 30 )
ERG5 ERG6 GIM4 GIM5 HOC1 HOG1 HSP26 KDX1 LDB19 MEH1
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Topics Genes linked to topics (#31 - 40 )
MRP1 MRP49 MRPL13 MRPL20 MRPL22 MRPL25 MRPL27 MRPL32 MRPL33 MRPL37
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Topics Genes linked to topics (#41 - 50 )
MRPL38 MRPL40 MRPL49 MRPL6 MRPL7 MRPS12 MRPS17 MRPS28 MRPS5 MRPS8
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Topics Genes linked to topics (#51 - 60 )
MVB12 PBS2 PEX1 PEX10 PEX12 PEX14 PEX15 PEX17 PEX19 PEX22
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Topics Genes linked to topics (#61 - 70 )
PEX4 PEX8 PRO1 PRO2 SCP160 SKY1 SMI1 SNF7 SNF8 SRN2
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SSK2 STE20 STP22 SWM2 TIP41 TPS1 TRP1 TRP2 TRP3 TRP4
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Topics Genes linked to topics (#81 - 90 )
TRP5 UBP6 VPS24 VPS25 VPS28 VPS30 VPS35 VPS36 VPS38 VPS4
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Topics Genes linked to topics (#91 - 94 )
VPS54 VPS68 VPS74 YOR139C
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