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Shirra MK, et al.  (2008) A Chemical Genomics Study Identifies Snf1 as a Repressor of GCN4 Translation. J Biol Chem 283(51):35889-98

Abstract: The Saccharomyces cerevisiae Snf1 kinase plays a critical role in recalibrating cellular metabolism in response to glucose depletion. Hundreds of genes show changes in expression levels when the SNF1 gene is deleted. However, cells can adapt to the absence of a specific gene when grown in long-term culture. Here we apply a chemical genetic method to rapidly and selectively inactivate a modified Snf1 kinase using a pyrazolopyrimidine inhibitor. By allowing cells to adjust to a change in carbon source prior to inhibition of the Snf1 kinase activity, we identified a set of genes whose expression increased when Snf1 was inhibited. Prominent in this set are genes that are activated by Gcn4, a transcriptional activator of amino acid biosynthetic genes. Deletion of Snf1 increased Gcn4 protein levels without affecting its mRNA levels. The increased Gcn4 protein levels required the Gcn2 kinase and Gcn20, regulators of GCN4 translation. These data indicate that Snf1 functions upstream of Gcn20 to regulate control of GCN4 translation in S. cerevisiae.

Status: Published Type: Journal Article PubMed ID: 18955495

Topics addressed in this paper

Number of different genes curated to this paper: 16

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
ARG3 GAL83 GCN2 GCN20 GCN4 HIS1 HIS4 HIS5 HOM2 MET22
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Topics Genes linked to topics (#11 - 16 )
SIP1 SIP2 SNF1 SNF4 STR3 SUC2
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