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Yuen KW, et al.  (2007) Systematic genome instability screens in yeast and their potential relevance to cancer. Proc Natl Acad Sci U S A 104(10):3925-30

Abstract: To systematically identify genes that maintain genome structure, yeast knockout mutants were examined by using three assays that followed marker inheritance in different chromosomal contexts. These screens identified 130 null mutant strains exhibiting chromosome instability (CIN) phenotypes. Differences in both phenotype severity and assay specificity were observed. The results demonstrate the advantages of using complementary assays to comprehensively identify genome maintenance determinants. Genome structure was important in determining the spectrum of gene and pathway mutations causing a chromosome instability phenotype. Protein similarity identified homologues in other species, including human genes with relevance to cancer. This extensive genome instability catalog can be combined with emerging genetic interaction data from yeast to support the identification of candidate targets for therapeutic elimination of chromosomally unstable cancer cells by selective cell killing.

Status: Published Type: Journal Article PubMed ID: 17360454

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Number of different genes curated to this paper: 130

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ADE1 ADE17 ADE6 ASF1 BIM1 BRE1 BUB1 BUB3 CDC73 CDH1
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CHL1 CHL4 CIN8 CLB5 CLN3 CMR1 CNN1 CSM3 CTF18 CTF19
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Topics Genes linked to topics (#21 - 30 )
CTF3 CTF4 CTF8 CYC8 CYK3 DCC1 DDC1 DIA2 DOC1 DUN1
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Topics Genes linked to topics (#31 - 40 )
ELG1 ESC2 EST3 ETR1 HCM1 HHF1 HST3 IML3 IRC15 ISA2
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Topics Genes linked to topics (#41 - 50 )
KAR3 KRE28 LGE1 LSM6 MAD1 MAD2 MCM16 MCM21 MCM22 MEC3
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Topics Genes linked to topics (#51 - 60 )
MFT1 MMS1 MMS22 MMS4 MRC1 MRE11 MUS81 NUP120 NUP133 OMA1
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Topics Genes linked to topics (#61 - 70 )
PAC10 PIG1 POL32 PSH1 RAD10 RAD17 RAD18 RAD24 RAD27 RAD5
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Topics Genes linked to topics (#71 - 80 )
RAD50 RAD51 RAD52 RAD54 RAD55 RAD57 RAD59 RAD6 RAD61 RAD9
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Topics Genes linked to topics (#81 - 90 )
RDH54 RMI1 RNH201 RNH202 RNH203 RPA12 RRM3 RTT107 RTT109 SGO1
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Topics Genes linked to topics (#91 - 100 )
SGS1 SHM2 SHP1 SIC1 SLX8 SNO1 SOV1 SPT2 SPT21 SRO7
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Topics Genes linked to topics (#101 - 110 )
SRS2 SSZ1 SWC3 THP1 THP2 TOF1 TOP3 TSA1 UBR1 UPS1
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Topics Genes linked to topics (#111 - 120 )
VID22 VPS64 WSS1 XRS2 YBP2 YBR099C YBR113W YDL162C YDR290W YGR064W
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Topics Genes linked to topics (#121 - 130 )
YJL007C YKL053W YLR235C YLR374C YML009C-A YML009W-B YNL140C YOR024W YOR300W YTA7
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