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Gross T and Kaufer NF  (1998) Cytoplasmic ribosomal protein genes of the fission yeast Schizosaccharomyces pombe display a unique promoter type: a suggestion for nomenclature of cytoplasmic ribosomal proteins in databases. Nucleic Acids Res 26(14):3319-22

Abstract: We identified 34 new ribosomal protein genes in the Schizosaccharomyces pombe database at the Sanger Centre coding for 30 different ribosomal proteins. All contain the Homol D-box in their promoter. We have shown that Homol D is, in this promoter type, the TATA-analogue. Many promoters contain the Homol E-box, which serves as a proximal activation sequence. Furthermore, comparative sequence analysis revealed a ribosomal protein gene encoding a protein which is the equivalent of the mammalian ribosomal protein L28. The budding yeast Saccharomyces cerevisiae has no L28 equivalent. Over the past 10 years we have isolated and characterized nine ribosomal protein (rp) genes from the fission yeast S.pombe . This endeavor yielded promoters which we have used to investigate the regulation of rp genes. Since eukaryotic ribosomal proteins are remarkably conserved and several rp genes of the budding yeast S.cerevisiae were sequenced in 1985, we probed DNA fragments encoding S.cerevisiae ribosomal proteins with genomic libraries of S.pombe . The deduced amino acid sequence of the different isolated rp genes of fission yeast share between 65 and 85% identical amino acids with their counterparts of budding yeast.

Status: Published Type: Journal Article PubMed ID: 9649613

Topics addressed in this paper

Number of different genes curated to this paper: 65

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Topics Genes linked to topics (#1 - 10 )
RPL10 RPL11A RPL11B RPL13A RPL13B RPL17A RPL17B RPL18A RPL18B RPL20A
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Topics Genes linked to topics (#11 - 20 )
RPL20B RPL22A RPL22B RPL23A RPL23B RPL24A RPL24B RPL25 RPL26A RPL26B
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Topics Genes linked to topics (#21 - 30 )
RPL28 RPL2A RPL2B RPL3 RPL30 RPL32 RPL38 RPL4A RPL4B RPL5
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Topics Genes linked to topics (#31 - 40 )
RPL7A RPL7B RPL8A RPL8B RPL9A RPL9B RPS10A RPS10B RPS11A RPS11B
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Topics Genes linked to topics (#41 - 50 )
RPS12 RPS13 RPS14A RPS14B RPS17A RPS17B RPS1A RPS1B RPS22A RPS22B
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Topics Genes linked to topics (#51 - 60 )
RPS23A RPS23B RPS28A RPS28B RPS30A RPS30B RPS5 RPS6A RPS6B RPS7A
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Topics Genes linked to topics (#61 - 65 )
RPS7B RPS8A RPS8B RPS9A RPS9B
Additional Literature blue ball blue ball blue ball blue ball blue ball
Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball

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