Pan X, et al. (2006) A DNA integrity network in the yeast Saccharomyces cerevisiae. Cell 124(5):1069-81
Abstract: A network governing DNA integrity was identified in yeast by a global genetic analysis of synthetic fitness or lethality defect (SFL) interactions. Within this network, 16 functional modules or minipathways were defined based on patterns of global SFL interactions. Modules or genes involved in DNA replication, DNA-replication checkpoint (DRC) signaling, and oxidative stress response were identified as the major guardians against lethal spontaneous DNA damage, efficient repair of which requires the functions of the DNA-damage checkpoint signaling and multiple DNA-repair pathways. This genome-wide genetic interaction network also identified novel components (DIA2, NPT1, HST3, HST4, and the CSM1 module) that potentially contribute to mitotic DNA replication and genomic stability and revealed novel functions of well-studied genes (the CTF18 module) in DRC signaling. This network will guide more detailed characterization of mechanisms governing DNA integrity in yeast and other organisms.
| Status: Published | Type: Journal Article | PubMed ID: 16487579 |
Topics addressed in this paper
Number of different genes curated to this paper: 38
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Topics not linked to Genes | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| BRE1 | CCS1 | CSM1 | CSM3 | CTF18 | CTF4 | CTF8 | DCC1 | DDC1 | DIA2 | ||
| Additional Literature | | | | | | | |||||
| Function/Process | | | | | | | |||||
| Genetic Interactions | | | | | | | | | |||
| Large-scale genetic interaction |
| ||||||||||
| Large-scale phenotype analysis |
| ||||||||||
| Mutants/Phenotypes | | | | | | | |||||
| Omics |
| ||||||||||
| Primary Literature | | | | | |||||||
| Regulation of | | ||||||||||
| Regulatory Role | | ||||||||||
| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| DUN1 | ELG1 | GET1 | GET2 | HST3 | HST4 | LGE1 | MEC3 | MRC1 | NPT1 | |
| Additional Literature | | | | | | | | | | |
| Function/Process | | | | | | | ||||
| Genetic Interactions | | | | | | |||||
| Mutants/Phenotypes | | | | | | |||||
| Primary Literature | | |||||||||
| Topics | Genes linked to topics (#21 - 30 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| POL32 | RAD17 | RAD18 | RAD24 | RAD27 | RAD5 | RAD53 | RAD6 | RAD9 | RRM3 | |
| Additional Literature | | | | | | | | | | |
| Function/Process | | | | | ||||||
| Genetic Interactions | | | | | | | ||||
| Mutants/Phenotypes | | | | | ||||||
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Genes linked to topics (#31 - 38 ) | |||||||
|---|---|---|---|---|---|---|---|---|
| SGS1 | SKN7 | SML1 | SOD1 | SRS2 | TOF1 | TSA1 | YAP1 | |
| Additional Literature | | | | | | | | |
| Genetic Interactions | | | | | | | | |
| Mutants/Phenotypes | | | ||||||





