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Zahedi RP, et al.  (2006) Proteomic analysis of the yeast mitochondrial outer membrane reveals accumulation of a subclass of preproteins. Mol Biol Cell 17(3):1436-50

Abstract: Monitoring Editor: Benjamin Glick Mitochondria consist of four compartments, outer membrane, intermembrane space, inner membrane and matrix, with crucial but distinct functions for numerous cellular processes. A comprehensive characterization of the proteome of an individual mitochondrial compartment has not been reported so far. We used a eukaryotic model organism, the yeast S. cerevisiae, to determine the proteome of highly purified mitochondrial outer membranes. We obtained a coverage of approximately 85% based on the known outer membrane proteins. The proteome represents a rich source for the analysis of new functions of the outer membrane, including the yeast homolog (Hfd1/Ymr110c) of the human protein causing Sjogren-Larsson syndrome. Surprisingly, a subclass of proteins known to reside in internal mitochondrial compartments were found in the outer membrane proteome. Those seemingly mislocalized proteins included most top scorers of a genome-wide analysis for mRNAs that were targeted to mitochondria and coded for proteins of prokaryotic origin (Marc et al., 2002, EMBO Rep. 3, 159). Together with the enrichment of the precursor form of a matrix protein in the outer membrane, we conclude that the mitochondrial outer membrane does not only contain resident proteins but also accumulates a conserved subclass of preproteins destined for internal mitochondrial compartments.

Status: Published Type: Journal Article PubMed ID: 16407407

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AFG1 AIM18 ALD4 ALO1 ATP15 ATP2 ATP3 ATP5 AYR1 BNA4
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FAA1 FIS1 FMP52 FUN14 FZO1 GEM1 GSF2 GTT1 GUT2 HFD1
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HSP10 HSP60 ILV2 ILV5 IML2 KGD1 LSP1 MCR1 MDH1 MDM10
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NCA2 NCP1 NDE1 NDI1 NUC1 OM45 PDA1 PDB1 PDH1 PET123
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PIL1 POR1 POR2 PTH2 QCR2 RDL1 RHO1 SAC1 SAM35 SAM37
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TCD1 TCD2 TIM44 TIM8 TIM9 TOM20 TOM22 TOM40 TOM5 TOM7
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TOM70 TOM71 TSC10 UBP16 UBX2 UGO1 UIP4 VPS1 VPS21 YDR381C-A
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