Ter Linde JJ, et al. (1999) Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae. J Bacteriol 181(24):7409-13
Abstract: The yeast Saccharomyces cerevisiae is unique among eukaryotes in exhibiting fast growth in both the presence and the complete absence of oxygen. Genome-wide transcriptional adaptation to aerobiosis and anaerobiosis was studied in assays using DNA microarrays. This technique was combined with chemostat cultivation, which allows controlled variation of a single growth parameter under defined conditions and at a fixed specific growth rate. Of the 6,171 open reading frames investigated, 5,738 (93%) yielded detectable transcript levels under either aerobic or anaerobic conditions; 140 genes showed a >3-fold-higher transcription level under anaerobic conditions. Under aerobic conditions, transcript levels of 219 genes were >3-fold higher than under anaerobic conditions.
| Status: Published | Type: Journal Article | PubMed ID: 10601195 |
Topics addressed in this paper
Number of different genes curated to this paper: 53
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| Topics | Topics not linked to Genes | Genes linked to topics (#1 - 10 ) | |||||||||
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| AAC3 | ADH2 | ADY2 | AGP1 | ANB1 | ARO10 | CIT3 | CLD1 | CTA1 | CYB2 | ||
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| Genomic expression study |
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| Omics |
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| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| DAN1 | DIP5 | FDH1 | FDH2 | FET3 | FET4 | FLO11 | FMP16 | FMP23 | FOX2 | |
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| RNA Levels and Processing | | | | | | | | | | |
| Topics | Genes linked to topics (#21 - 30 ) | |||||||||
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| GND2 | GRE1 | HEM13 | HMX1 | HXT5 | ICL1 | IDP2 | IRC10 | OPT2 | PXA1 | |
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| RNA Levels and Processing | | | | | | | | | | |
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The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
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| Topics | Genes linked to topics (#31 - 40 ) | |||||||||
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| SFC1 | SHH3 | SPG1 | SPG4 | SPS100 | SUE1 | SUT1 | TIR1 | TIR2 | YBL029W | |
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| RNA Levels and Processing | | | | | | | | | | |
| Topics | Genes linked to topics (#41 - 50 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| YDL218W | YDL241W | YER188W | YHL042W | YHL044W | YHR210C | YIG1 | YLL053C | YLR413W | YML083C | |
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| RNA Levels and Processing | | | | | | | | | | |
| Topics | Genes linked to topics (#51 - 53 ) | ||
|---|---|---|---|
| YNL195C | YPL276W | YSR3 | |
| Additional Literature | | | |
| Regulation of | | | |
| RNA Levels and Processing | | | |
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- displays other papers with information about that topic for that gene.
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The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
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