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Sambade M, et al.  (2005) A genomic screen for yeast vacuolar membrane ATPase mutants. Genetics 170(4):1539-51

Abstract: V-ATPases acidify multiple organelles, and yeast mutants lacking V-ATPase activity exhibit a distinctive set of growth defects. To better understand the requirements for organelle acidification and the basis of these growth phenotypes, ~4700 yeast deletion mutants were screened for growth defects at pH 7.5 in 60 mM CaCl2. In addition to 13 of 16 mutants lacking known V-ATPase subunits or assembly factors, 50 additional mutants were identified. Sixteen of these also grew poorly in non-fermentable carbon sources, like the known V-ATPase mutants, and were analyzed further. The cwh36Delta mutant exhibited the strongest phenotype; this mutation proved to disrupt a previously uncharacterized V-ATPase subunit. A small subset of the mutations implicated in vacuolar protein sorting, vps34Delta, vps15Delta, vps45Delta, and vps16Delta, caused both Vma- growth phenotypes and lower V-ATPase activity in isolated vacuoles, as did the shp1Delta mutation, implicated in both protein sorting and regulation of the Glc7p protein phosphatase. These proteins may regulate V-ATPase targeting and/or activity. Eight mutants showed a Vma- growth phenotype but no apparent defect in vacuolar acidification. Like V-ATPase-deficient mutants, most of these mutants rely on calcineurin for growth, particularly at high pH. A requirement for constitutive calcineurin activation may be the predominant physiological basis of the Vma- growth phenotype.

Status: Published Type: Journal Article PubMed ID: 15937126

Topics addressed in this paper

Number of different genes curated to this paper: 49

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
ADA2 AFT1 ANP1 ARO1 CAK1 CKB2 CLC1 CRZ1 CTR1 CYS4
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Topics Genes linked to topics (#11 - 20 )
GET2 GLY1 ILV1 KEX2 KRE1 LDB7 NGG1 PET20 PHO2 PHO4
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Topics Genes linked to topics (#21 - 30 )
PHO81 PHO85 PTC1 RIB4 RNR1 RPB4 SHP1 SNF5 SNF6 SWI3
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Topics Genes linked to topics (#31 - 40 )
TAT1 TRP1 TRP2 TRP3 TRP4 TRP5 VMA3 VMA5 VMA9 VPS15
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Topics Genes linked to topics (#41 - 49 )
VPS16 VPS34 VPS45 VPS54 YDR114C YEL045C YJL175W YMR031W-A ZAP1
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