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Perumal K and Reddy R  (2002) The 3' end formation in small RNAs. Gene Expr 10(1-2):59-78

Abstract: Small RNAs are a major class of RNAs along with transfer RNAs, ribosomal RNAs, and messenger RNAs. They vary in size from less than 100 nucleotides to several thousand nucleotides and have been identified and characterized both in prokaryotes and eukaryotes. Small RNAs participate in a variety of cellular functions including regulating RNA synthesis, RNA processing, guiding modifications in RNA, and in transport of proteins. Small RNAs are generated by a series of posttranscriptional processing steps following transcription. While RNA 5' end structure, 5' cap formation, and RNA processing mechanisms have been fairly well characterized, the 3' end processing is poorly understood. Recent data point to an emerging theme in small RNAs metabolism in which the 3' end processing is mediated by the exosome, a large multienzyme complex. In addition to removal of nucleotides by the exosome, there is simultaneous rebuilding of the 3' end of some small RNA by adenylation and/or uridylation. This review presents a picture of both degradative and rebuilding reactions operative on the 3' end of some small RNA molecules in prokaryotes and eukaryotes.

Status: Published Type: Journal Article | Review | Review, Academic PubMed ID: 11868988

Topics addressed in this paper

Number of different genes curated to this paper: 103

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Topics Genes linked to topics (#1 - 10 )
CSL4 DIS3 LSR1 MTR3 MTR4 RAT1 RDN5-1 RDN58-1 RDN58-2 RNT1
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#11 - 20 )
RRP4 RRP40 RRP42 RRP43 RRP45 RRP46 RRP6 SCR1 SKI2 SKI3
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#21 - 30 )
SKI6 SKI8 SNR10 SNR11 SNR128 SNR13 SNR14 SNR17A SNR17B SNR18
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Reviews blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#31 - 40 )
SNR189 SNR19 SNR190 SNR191 SNR24 SNR3 SNR30 SNR31 SNR32 SNR33
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#41 - 50 )
SNR34 SNR35 SNR36 SNR37 SNR38 SNR39 SNR39B SNR4 SNR40 SNR41
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#51 - 60 )
SNR42 SNR43 SNR44 SNR45 SNR46 SNR47 SNR48 SNR49 SNR5 SNR50
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Reviews blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#61 - 70 )
SNR51 SNR52 SNR53 SNR54 SNR55 SNR56 SNR57 SNR58 SNR59 SNR6
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#71 - 80 )
SNR60 SNR61 SNR62 SNR63 SNR64 SNR65 SNR66 SNR67 SNR68 SNR69
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Reviews blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#81 - 90 )
SNR7-L SNR7-S SNR70 SNR71 SNR72 SNR73 SNR74 SNR75 SNR76 SNR77
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Reviews blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#91 - 100 )
SNR78 SNR79 SNR8 SNR80 SNR81 SNR82 SNR83 SNR84 SNR85 SNR86
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Reviews blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#101 - 103 )
SNR87 SNR9 XRN1
Non-Fungal Related Genes/Proteins blue ball blue ball blue ball
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