Von Der Haar F and Gaertner E (1975) Phenylalanyl-tRNA synthetase from baker's yeast: role of 3'-terminal adenosine of tRNA-Phe in enzyme-substrate interaction studied with 3'-modified tRNA-Phe species. Proc Natl Acad Sci U S A 72(4):1378-82
Abstract: TRNA-Phe species from baker's yeast modified at the 3'-terminus in many cases are phenylalanylatable substrates. Out of several tRNA-Phe species possessing a modified 3'-end that cannot be phenylalanylated, only two, tRNA-Phe-C-C-2'dA and the tRNA-Phe-C-C-formycin-oxi-red, are strong competitive inhibitors for tRNA-Phe-C-C-A during phenylalanylation. In the ATP/PPi exchange, both these inhibitors reduce Vmax to about 25%; but whereas tRNA-Phe-C-C-2dA has no influence on KmATP and Km Phe during ATP/PPi exchange, tRNA-Phe-C-C-formycin-oxi-red reduces KmATP from 1430 muM, found in the absence of tRNA-Phe, to 230 muM, and Km-Phe, from 38 to 14 muM. The values found in the presence of tRNA-Phe-C-C-formycin-oxi-red during ATP/PPi exchange are identical with those determined in the phenylalanylation of tRNA-Phe-C-C-A. All other tRNA-Phe species carryinga modified 3'end that cannot be phenylalanylated exhibit a mixed competitive-noncompetitive inhibition in the phenylalanylation reaction. In the ATP/PPi exchange, they do not influence KmATP and KmPHE and only weakly, if at all, Vmax. The results show that the 3'adenosine of tRNA-Phe cannot solely be a passive acceptor for phenylalanine, but must in addition play an active role during enzyme-substrate interaction. The data can be consistently explained by the hypothesis that the 3'-adenosine of tRNA-Phe triggers a conformational change of the enzyme.
| Status: Published | Type: Journal Article | PubMed ID: 1093181 |
Topics addressed in this paper
Number of different genes curated to this paper: 13
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| FRS1 | FRS2 | tF(GAA)B | tF(GAA)D | tF(GAA)F | tF(GAA)G | tF(GAA)H1 | tF(GAA)H2 | tF(GAA)M | tF(GAA)N | |
| DNA/RNA Sequence Features | | | | | | | | | ||
| Function/Process | | | ||||||||
| Primary Literature | | | | | | | | | | |
| Protein Physical Properties | | | ||||||||
| Protein-Nucleic Acid Interactions | | | | | | | | | ||
| RNA Levels and Processing | | | | | | | | | ||
| Substrates/Ligands/Cofactors | | | ||||||||
| Topics | Genes linked to topics (#11 - 13 ) | ||
|---|---|---|---|
| tF(GAA)P1 | tF(GAA)P2 | tF(GAA)Q | |
| DNA/RNA Sequence Features | | | |
| Primary Literature | | | |
| Protein-Nucleic Acid Interactions | | | |
| RNA Levels and Processing | | | |




