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Rieger KJ, et al.  (1999) Chemotyping of yeast mutants using robotics. Yeast 15(10B):973-86

Abstract: By now, the EUROFAN programme for the functional analysis of genes from the yeast genome has attained its cruising speed. Indeed, several hundreds of yeast mutants with no phenotype as tested by growth on standard media and no significant sequence similarity to proteins of known function are available through the efforts of various laboratories. Based on the methodology initiated during the pilot project on yeast chromosome III (Yeast 13, 1547-1562, 1997) we adapted it to High Throughput Screening (HTS), using robotics. The first 100 different gene deletions from EUROSCARF, constructed in an FY1679 strain background, were run against a collection of about 300 inhibitors. Many of these inhibitors have not been reported until now to interfere in vivo with growth of Saccharomyces cerevisiae. In the present paper we provide a list of novel growth conditions and a compilation of 49 yeast deletants (from chromosomes II, IV, VII, X, XIV, XV) corresponding to 58% of the analysed genes, with at least one clear and stringent phenotype. The majority of these deletants are sensitive to one or two compounds (monotropic phenotype) while a distinct subclass of deletants displays a hyper-pleiotropic phenotype with sensitivities to a dozen or more compounds. Therefore, chemotyping of unknown genes with a large spectrum of drugs opens new vistas for a more in-depth functional analysis and a more precise definition of molecular targets.CI - Copyright 1999 John Wiley & Sons, Ltd.

Status: Published Type: Journal Article PubMed ID: 10407277

Topics addressed in this paper

Number of different genes curated to this paper: 85

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
ADY3 AIM22 AIM6 AMA1 AQR1 AZR1 BIT61 CAF40 CSH1 CST26
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Large-scale phenotype analysis blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#11 - 20 )
CUS2 CYK3 DGK1 DLS1 DTR1 DUF1 ECM25 EDE1 FAT1 FLR1
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Topics Genes linked to topics (#21 - 30 )
GAS4 GRX6 GRX7 GUD1 HBT1 HCH1 HSV2 IES2 IKS1 IRC8
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Topics Genes linked to topics (#31 - 40 )
IZH4 LAA1 LAS21 LDB19 LOH1 LSB1 MBB1 MGS1 MPD2 MTQ1
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Topics Genes linked to topics (#41 - 50 )
NAS6 NDJ1 OCA2 PEX17 PHB2 QDR3 RCY1 RGD1 RRG9 RTT101
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Topics Genes linked to topics (#51 - 60 )
RTT106 SLZ1 SMP1 SPO21 SUN4 SWD3 TLG2 TOS1 TOS2 TPN1
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Function/Process blue ball
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Topics Genes linked to topics (#61 - 70 )
UBX6 VAC7 VID27 WSC2 WSC3 YBR016W YGR226C YHC3 YJL045W YJL049W
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Topics Genes linked to topics (#71 - 80 )
YJL055W YJL169W YJL206C YJL213W YLR036C YLR042C YNL058C YNL200C YNL208W YNL211C
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#81 - 85 )
YNL217W YNL285W YOL098C YPT10 ZAP1
Additional Literature blue ball blue ball blue ball blue ball
Large-scale phenotype analysis blue ball blue ball blue ball blue ball blue ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball blue ball
Primary Literature blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball
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