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Hampsey M  (1998) Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol Mol Biol Rev 62(2):465-503

Abstract: Transcription initiation by RNA polymerase II (RNA pol II) requires interaction between cis-acting promoter elements and trans-acting factors. The eukaryotic promoter consists of core elements, which include the TATA box and other DNA sequences that define transcription start sites, and regulatory elements, which either enhance or repress transcription in a gene-specific manner. The core promoter is the site for assembly of the transcription preinitiation complex, which includes RNA pol II and the general transcription fctors TBP, TFIIB, TFIIE, TFIIF, and TFIIH. Regulatory elements bind gene-specific factors, which affect the rate of transcription by interacting, either directly or indirectly, with components of the general transcriptional machinery. A third class of transcription factors, termed coactivators, is not required for basal transcription in vitro but often mediates activation by a broad spectrum of activators. Accordingly, coactivators are neither gene-specific nor general transcription factors, although gene-specific coactivators have been described in metazoan systems. Transcriptional repressors include both gene-specific and general factors. Similar to coactivators, general transcriptional repressors affect the expression of a broad spectrum of genes yet do not repress all genes. General repressors either act through the core transcriptional machinery or are histone related and presumably affect chromatin function. This review focuses on the global effectors of RNA polymerase II transcription in yeast, including the general transcription factors, the coactivators, and the general repressors. Emphasis is placed on the role that yeast genetics has played in identifying these factors and their associated functions.

Status: Published Type: Journal Article | Review | Review, Tutorial PubMed ID: 9618449

Topics addressed in this paper

Number of different genes curated to this paper: 82

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Topics Genes linked to topics (#1 - 10 )
BUR2 BUR6 CCL1 CCR4 CDC36 CDC39 CYC8 DBF2 GAL11 HHT1
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Topics Genes linked to topics (#11 - 20 )
KIN28 MED1 MED2 MED4 MED6 MED7 MED8 MOT1 MOT2 NCB2
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NOT3 NOT5 PGD1 POP2 RAD3 RGR1 ROX3 RPB10 RPB11 RPB2
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Topics Genes linked to topics (#31 - 40 )
RPB3 RPB4 RPB5 RPB7 RPB8 RPB9 RPC10 RPD3 RPO21 RPO26
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Topics Genes linked to topics (#41 - 50 )
SGV1 SIN3 SIN4 SPT15 SPT4 SPT5 SPT6 SRB2 SRB4 SRB5
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Topics Genes linked to topics (#51 - 60 )
SRB6 SRB7 SRB8 SSL1 SSL2 SSN2 SSN3 SSN8 SUA7 TAF1
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Topics Genes linked to topics (#61 - 70 )
TAF10 TAF11 TAF12 TAF13 TAF14 TAF2 TAF3 TAF5 TAF6 TAF7
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Topics Genes linked to topics (#71 - 80 )
TAF9 TFA1 TFA2 TFB1 TFB2 TFB3 TFB4 TFG1 TFG2 TOA1
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Topics Genes linked to topics (#81 - 82 )
TOA2 TUP1
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