PHO5/YBR093C Literature Guide Help

Other names published for PHO5: phoE, YBR093C

PHO5 - Transcription (83)

ReferenceOther Genes Addressed
Geisler S, et al.  (2012) Decapping of long noncoding RNAs regulates inducible genes. Mol Cell 45(3):279-91
Genereaux J, et al.  (2012) Genetic evidence links the ASTRA protein chaperone component Tti2 to the SAGA transcription factor Tra1. Genetics 191(3):765-80
Kvas S, et al.  (2012) Loss of nonsense mediated decay suppresses mutations in Saccharomyces cerevisiae TRA1. BMC Genet 13(1):19
Lanza AM, et al.  (2012) Linking yeast Gcn5p catalytic function and gene regulation using a quantitative, graded dominant mutant approach. PLoS One 7(4):e36193
Llopis S, et al.  (2012) Transcriptomics in human blood incubation reveals the importance of oxidative stress response in Saccharomyces cerevisiae clinical strains. BMC Genomics 13(1):419
Mahmud SA, et al.  (2012) Understanding the mechanism of heat stress tolerance caused by high trehalose accumulation in Saccharomyces cerevisiae using DNA microarray. J Biosci Bioeng 113(4):526-8
Neumann FR, et al.  (2012) Targeted INO80 enhances subnuclear chromatin movement and ectopic homologous recombination. Genes Dev 26(4):369-83
Brown CR, et al.  (2011) In vivo role for the chromatin-remodeling enzyme SWI/SNF in the removal of promoter nucleosomes by disassembly rather than sliding. J Biol Chem 286(47):40556-65
Mao C, et al.  (2011) Occlusion of regulatory sequences by promoter nucleosomes in vivo. PLoS One 6(3):e17521
Rizzo JM, et al.  (2011) Tup1 stabilizes promoter nucleosome positioning and occupancy at transcriptionally plastic genes. Nucleic Acids Res 39(20):8803-19
Tu WY, et al.  (2011) Rpl12p affects the transcription of the PHO pathway high-affinity inorganic phosphate transporters and repressible phosphatases. Yeast 28(6):481-93
Wang SS, et al.  (2011) Histone H3 lysine 4 hypermethylation prevents aberrant nucleosome remodeling at the PHO5 promoter. Mol Cell Biol 31(15):3171-81
Zhou BO and Zhou JQ  (2011) Recent transcription-induced histone H3 lysine 4 (H3K4) methylation inhibits gene reactivation. J Biol Chem 286(40):34770-6
Chaves S, et al.  (2010) Cks1, Cdk1, and the 19S Proteasome Collaborate To Regulate Gene Induction-Dependent Nucleosome Eviction in Yeast. Mol Cell Biol 30(22):5284-94
Mao C, et al.  (2010) Quantitative analysis of the transcription control mechanism. Mol Syst Biol 6():431
Zhang N and Oliver SG  (2010) The transcription activity of Gis1 is negatively modulated by proteasome-mediated limited proteolysis. J Biol Chem 285(9):6465-76
Gagneur J, et al.  (2009) Genome-wide allele- and strand-specific expression profiling. Mol Syst Biol 5:274
Ginsburg DS, et al.  (2009) NuA4 Lysine Acetyltransferase Esa1 Is Targeted to Coding Regions and Stimulates Transcription Elongation with Gcn5. Mol Cell Biol 29(24):6473-87
Krishnamurthy S, et al.  (2009) Functional interaction of the Ess1 prolyl isomerase with components of the RNA polymerase II initiation and termination machineries. Mol Cell Biol 29(11):2925-34
Ohsawa R, et al.  (2009) Epigenetic inheritance of an inducibly nucleosome-depleted promoter and its associated transcriptional state in the apparent absence of transcriptional activators. Epigenetics Chromatin 2(1):11
Peiro-Chova L and Estruch F  (2009) The yeast RNA polymerase II-associated factor Iwr1p is involved in the basal and regulated transcription of specific genes. J Biol Chem 284(42):28958-67
Pinson B, et al.  (2009) Metabolic intermediates selectively stimulate transcription factor interaction and modulate phosphate and purine pathways. Genes Dev 23(12):1399-407
Pondugula S, et al.  (2009) Coupling phosphate homeostasis to cell cycle-specific transcription: mitotic activation of Saccharomyces cerevisiae PHO5 by Mcm1 and Forkhead proteins. Mol Cell Biol 29(18):4891-905
Wippo CJ, et al.  (2009) Differential cofactor requirements for histone eviction from two nucleosomes at the yeast PHO84 promoter are determined by intrinsic nucleosome stability. Mol Cell Biol 29(11):2960-81
Boeger H, et al.  (2008) Nucleosome retention and the stochastic nature of promoter chromatin remodeling for transcription. Cell 133(4):716-26
Del Rosario BC and Pemberton LF  (2008) Nap1 links transcription elongation, chromatin assembly, and messenger RNP complex biogenesis. Mol Cell Biol 28(7):2113-24
Hoke SM, et al.  (2008) A conserved central region of yeast ada2 regulates the histone acetyltransferase activity of gcn5 and interacts with phospholipids. J Mol Biol 384(4):743-55
Kim HD and O'Shea EK  (2008) A quantitative model of transcription factor-activated gene expression. Nat Struct Mol Biol 15(11):1192-8
Lam FH, et al.  (2008) Chromatin decouples promoter threshold from dynamic range. Nature 453(7192):246-250
Nishizawa M, et al.  (2008) Nutrient-Regulated Antisense and Intragenic RNAs Modulate a Signal Transduction Pathway in Yeast. PLoS Biol 6(12):e326