tF(GAA)N Literature Guide Help

tF(GAA)N - Techniques and Reagents (20)

ReferenceOther Genes Addressed
Krivos KL, et al.  (2011) Removal of 3'-phosphate group by bacterial alkaline phosphatase improves oligonucleotide sequence coverage of RNase digestion products analyzed by collision-induced dissociation mass spectrometry. Rapid Commun Mass Spectrom 25(23):3609-16
Seetin MG and Mathews DH  (2011) Automated RNA tertiary structure prediction from secondary structure and low-resolution restraints.LID - 10.1002/jcc.21806 [doi] J Comput Chem ()
Rambo RP and Tainer JA  (2010) Improving small-angle X-ray scattering data for structural analyses of the RNA world. RNA 16(3):638-46
Jenek M and Kierzek E  (2008) Isoenergetic microarray mapping - the advantages of this method in studying the structure of Saccharomyces cerevisiae tRNAPhe. Nucleic Acids Symp Ser (Oxf) (52):219-20
Manuilov AV, et al.  (2007) New photoreactive tRNA derivatives for probing the peptidyl transferase center of the ribosome. RNA 13(5):793-800
Suzuki T, et al.  (2007) Mass spectrometric identification and characterization of RNA-modifying enzymes. Methods Enzymol 425():211-29
Swiatkowska A, et al.  (2007) Structural Features of Target RNA Molecules Greatly Modulate the Cleavage Efficiency of trans-Acting Delta Ribozymes. Biochemistry 46(18):5523-33
Rodriguez EA, et al.  (2006) In vivo incorporation of multiple unnatural amino acids through nonsense and frameshift suppression. Proc Natl Acad Sci U S A 103(23):8650-5
Brauns EB and Dyer RB  (2005) Time-resolved infrared spectroscopy of RNA folding. Biophys J 89(5):3523-30
Fouace S, et al.  (2004) Polyamine derivatives as selective RNaseA mimics. Nucleic Acids Res 32(1):151-7
Nobles KN, et al.  (2002) Highly conserved modified nucleosides influence Mg2+-dependent tRNA folding. Nucleic Acids Res 30(21):4751-60
Shelton VM, et al.  (1999) Applicability of urea in the thermodynamic analysis of secondary and tertiary RNA folding. Biochemistry 38(51):16831-9
Maglott EJ and Glick GD  (1998) Probing structural elements in RNA using engineered disulfide cross-links. Nucleic Acids Res 26(5):1301-8
Krzyzosiak WJ and Ciesiolka J  (1983) Long-range conformational transition in yeast tRNAPhe, induced by the Y-base removal and detected by chloroacetaldehyde modification. Nucleic Acids Res 11(19):6913-21
Fritzinger DC and Fournier MJ  (1982) Carbodiimide modification analysis of aminoacylated yeast phenylalanine tRNA: evidence for change in the apex region. Nucleic Acids Res 10(7):2419-37
Roy S, et al.  (1982) Procedure for C2 deuteration of nucleic acids and determination of A psi 31 pseudouridine conformation by nuclear Overhauser effect in yeast tRNAPhe. Nucleic Acids Res 10(24):8341-9
Rhodes D  (1977) Initial stages of the thermal unfolding of yeast phenylalanine transfer RNA as studied by chemical modification: the effect of magnesium. Eur J Biochem 81(1):91-101
Dvorak DJ and Kidson C  (1976) Aminoacyl-tRNA conformation. Information from steroid and oligonucleotide probes. J Biol Chem 251(21):6730-4
von der Haar  (1976) Phenylalanyl-tRNA synthetase from baker's yeast: specificity and quantitation of affinity elution with tRNA. Hoppe Seylers Z Physiol Chem 357(6):819-23
Kan LS, et al.  (1975) Proton magnetic resonance studies on the conformation of the hexanucleotide, GmpApApYpApsiP, and Related fragments from the anticodong loop of baker's yeast phenylalanine transfer ribonucleic acid. Biochemistry 14(14):3278-91