RPO21/YDL140C Literature Guide Help

Other names published for RPO21: RPB1, RPB220, SUA8, B220, YDL140C

RPO21 - Techniques and Reagents (56)

ReferenceOther Genes Addressed
Fuchs SM, et al.  (2012) RNA polymerase II carboxyl-terminal domain phosphorylation regulates protein stability of the Set2 methyltransferase and histone H3 di- and trimethylation at lysine 36. J Biol Chem 287(5):3249-56
Kebaara BW, et al.  (2012) Analysis of Nonsense-Mediated mRNA Decay in Saccharomyces cerevisiae. Curr Protoc Cell Biol Chapter 27():Unit27.3
Ma Z, et al.  (2012) Multiple roles for the Ess1 prolyl isomerase in the RNA polymerase II transcription cycle. Mol Cell Biol 32(17):3594-607
Palangat M, et al.  (2012) Efficient reconstitution of transcription elongation complexes for single-molecule studies of eukaryotic RNA polymerase II. Transcription 3(3):146-53
Perez-Ortin JE, et al.  (2012) Genome-wide studies of mRNA synthesis and degradation in eukaryotes. Biochim Biophys Acta 1819(6):604-15
Zamft B, et al.  (2012) Nascent RNA structure modulates the transcriptional dynamics of RNA polymerases. Proc Natl Acad Sci U S A 109(23):8948-53
Cheung AC, et al.  (2011) Structural basis of initial RNA polymerase II transcription. EMBO J 30(23):4755-63
Garcia-Lopez MC, et al.  (2011) The conserved foot domain of RNA pol II associates with proteins involved in transcriptional initiation and/or early elongation. Genetics 189(4):1235-48
Mosley AL, et al.  (2011) Highly reproducible label free quantitative proteomic analysis of RNA polymerase complexes. Mol Cell Proteomics 10(2):M110.000687
Peil K, et al.  (2011) Uniform distribution of elongating RNA polymerase II complexes in transcribed gene locus. J Biol Chem 286(27):23817-22
Ruan W, et al.  (2011) Evolution of two modes of intrinsic RNA polymerase transcript cleavage. J Biol Chem 286(21):18701-7
Wang S, et al.  (2010) An RNA-based transcription activator derived from an inhibitory aptamer. Nucleic Acids Res 38(7):2378-86
Galburt EA, et al.  (2009) Single molecule transcription elongation. Methods 48(4):323-32
Hong SW, et al.  (2009) Phosphorylation of the RNA polymerase II C-terminal domain by TFIIH kinase is not essential for transcription of Saccharomyces cerevisiae genome. Proc Natl Acad Sci U S A 106(34):14276-80
Kim M, et al.  (2009) Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7. J Biol Chem 284(39):26421-6
Kireeva M, et al.  (2009) Millisecond phase kinetic analysis of elongation catalyzed by human, yeast, and Escherichia coli RNA polymerase. Methods 48(4):333-45
Pelechano V, et al.  (2009) Regulon-specific control of transcription elongation across the yeast genome. PLoS Genet 5(8):e1000614
Brueckner F and Cramer P  (2008) Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation. Nat Struct Mol Biol 15(8):811-8
Jung J, et al.  (2008) A Novel Approach to Investigating Protein/Protein Interactions and Their Functions by TAP-tagged Yeast Strains and its Application to Examine Yeast Transcription Machinery. J Microbiol Biotechnol 18(4):631-8
Ursic D, et al.  (2008) Detecting phosphorylation-dependent interactions with the C-terminal domain of RNA polymerase II subunit Rpb1p using a yeast two-hybrid assay. RNA Biol 5(1):1-4
Adkins MW, et al.  (2007) Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators. Mol Cell Biol 27(18):6372-82
Galburt EA, et al.  (2007) Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner. Nature 446(7137):820-3
Kim B, et al.  (2007) The transcription elongation factor TFIIS is a component of RNA polymerase II preinitiation complexes. Proc Natl Acad Sci U S A 104(41):16068-73
Tardiff DF, et al.  (2007) Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking. Proc Natl Acad Sci U S A 104(50):19948-53
Wyce A, et al.  (2007) H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex. Mol Cell 27(2):275-88
Linder T, et al.  (2006) The classical srb4-138 mutant allele causes dissociation of yeast Mediator. Biochem Biophys Res Commun 349(3):948-53
Kizer KO, et al.  (2005) A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation. Mol Cell Biol 25(8):3305-16
Knoppe DG, et al.  (2005) [Photoactivated analogues of the initiating substrates of RNA polymerase II based on arylazide derivatives of NTP gamma-amidophosphate: synthesis and chemical and photochemical reactions of functional groups] Bioorg Khim 31(4):372-84
Mulder KW, et al.  (2005) DNA damage and replication stress induced transcription of RNR genes is dependent on the Ccr4-Not complex. Nucleic Acids Res 33(19):6384-92
Somesh BP, et al.  (2005) Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest. Cell 121(6):913-23