tF(GAA)Q Literature Guide Help

tF(GAA)Q - Substrates/Ligands/Cofactors (22)

ReferenceOther Genes Addressed
Wrzesinski J and Ciesiolka J  (2005) Characterization of structure and metal ions specificity of Co2+-binding RNA aptamers. Biochemistry 44(16):6257-68
Hoogstraten CG and Britt RD  (2002) Water counting: quantitating the hydration level of paramagnetic metal ions bound to nucleotides and nucleic acids. RNA 8(2):252-60
Nobles KN, et al.  (2002) Highly conserved modified nucleosides influence Mg2+-dependent tRNA folding. Nucleic Acids Res 30(21):4751-60
Serebrov V, et al.  (2001) Mg2+-induced tRNA folding. Biochemistry 40(22):6688-98
Fang X, et al.  (2000) Mg2+-dependent compaction and folding of yeast tRNAPhe and the catalytic domain of the B. subtilis RNase P RNA determined by small-angle X-ray scattering. Biochemistry 39(36):11107-13
Jovine L, et al.  (2000) The crystal structure of yeast phenylalanine tRNA at 2.0 A resolution: cleavage by Mg(2+) in 15-year old crystals. J Mol Biol 301(2):401-14
Misra VK and Draper DE  (2000) Mg(2+) binding to tRNA revisited: the nonlinear Poisson-Boltzmann model. J Mol Biol 299(3):813-25
Shi H and Moore PB  (2000) The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited. RNA 6(8):1091-105
Friederich MW, et al.  (1998) Global flexibility of tertiary structure in RNA: yeast tRNAPhe as a model system. Proc Natl Acad Sci U S A 95(7):3572-7
Heerschap A, et al.  (1983) Nuclear magnetic resonance studies on yeast tRNAPhe. II. Assignment of the iminoproton resonances of the anticodon and T stem by means of nuclear Overhauser effect experiments at 500 MHz. Nucleic Acids Res 11(13):4483-99
Heerschap A, et al.  (1983) Nuclear magnetic resonance studies on yeast tRNAPhe. III. Assignments of the iminoproton resonances of the tertiary structure by means of nuclear Overhauser effect experiments at 500 MHz. Nucleic Acids Res 11(13):4501-20
Tropp JS and Redfield AG  (1983) Proton exchange rates in transfer RNA as a function of spermidine and magnesium. Nucleic Acids Res 11(7):2121-34
Vlassov VV, et al.  (1983) Interaction of tRNAPhe and tRNAVal with aminoacyl-tRNA synthetases. A chemical modification study. Eur J Biochem 132(3):537-44
Fritzinger DC and Fournier MJ  (1982) Carbodiimide modification analysis of aminoacylated yeast phenylalanine tRNA: evidence for change in the apex region. Nucleic Acids Res 10(7):2419-37
Favorova OO, et al.  (1981) Partial digestion of tRNA--aminoacyl-tRNA synthetase complexes with cobra venom ribonuclease. Biochemistry 20(4):1006-11
Vlassov VV, et al.  (1981) Tertiary structure of tRNAs in solution monitored by phosphodiester modification with ethylnitrosourea. Eur J Biochem 119(1):51-9
Negishi K, et al.  (1979) Chemical modification study of aminoacyl-tRNA conformation. Nucleic Acids Res 6(3):899-914
Rhodes D  (1977) Initial stages of the thermal unfolding of yeast phenylalanine transfer RNA as studied by chemical modification: the effect of magnesium. Eur J Biochem 81(1):91-101
Dvorak DJ and Kidson C  (1976) Aminoacyl-tRNA conformation. Information from steroid and oligonucleotide probes. J Biol Chem 251(21):6730-4
Yoon K, et al.  (1976) The kinetics of binding of U-U-C-A to a dodecanucleotide anticodon fragment from yeast tRNA-Phe. Nucleic Acids Res 3(9):2233-41
Robison B and Zimmerman TP  (1971) A conformational study of yeast phenylalanine transfer ribonucleic acid. J Biol Chem 246(1):110-7
Schmidt J, et al.  (1970) Effect of cleaving the dihydrouridine loop and the ribothymidine loop on the amino acid acceptor activity of yeast phenylalanine transfer ribonucleic acid. J Biol Chem 245(21):5743-50