RNT1/YMR239C Literature Guide Help

Other names published for RNT1: YMR239C

RNT1 - Substrates/Ligands/Cofactors (34)

ReferenceOther Genes Addressed
Catala M, et al.  (2012) RNA-dependent regulation of the cell wall stress response. Nucleic Acids Res 40(15):7507-17
Egecioglu DE, et al.  (2012) Quality control of MATa1 splicing and exon skipping by nuclear RNA degradation. Nucleic Acids Res 40(4):1787-96
Lavoie M, et al.  (2012) Regulation of conditional gene expression by coupled transcription repression and RNA degradation. Nucleic Acids Res 40(2):871-83
Babiskin AH and Smolke CD  (2011) Engineering ligand-responsive RNA controllers in yeast through the assembly of RNase III tuning modules. Nucleic Acids Res 39(12):5299-311
Meaux S, et al.  (2011) Reporter mRNAs cleaved by Rnt1p are exported and degraded in the cytoplasm. Nucleic Acids Res 39(21):9357-67
Neil H and Jacquier A  (2011) Enrichment of unstable non-coding RNAs and their genome-wide identification. Methods Mol Biol 759():87-106
Wang Z, et al.  (2011) Structure of a Yeast RNase III dsRBD Complex with a Noncanonical RNA Substrate Provides New Insights into Binding Specificity of dsRBDs. Structure 19(7):999-1010
Braglia P, et al.  (2010) Role of the RNA/DNA kinase Grc3 in transcription termination by RNA polymerase I. EMBO Rep 11(10):758-64
Ghazal G, et al.  (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109
Lavoie M and Abou Elela S  (2008) Yeast ribonuclease III uses a network of multiple hydrogen bonds for RNA binding and cleavage. Biochemistry 47(33):8514-26
Lamontagne B and Abou Elela S  (2007) Short RNA guides cleavage by eukaryotic RNase III. PLoS One 2(5):e472
Larose S, et al.  (2007) RNase III-dependent regulation of yeast telomerase. J Biol Chem 282(7):4373-81
Gaudin C, et al.  (2006) Structure of an AAGU Tetraloop and its Contribution to Substrate Selection by yeast RNase III. J Mol Biol 363(2):322-31
Ghazal G and Elela SA  (2006) Characterization of the Reactivity Determinants of a Novel Hairpin Substrate of Yeast RNase III. J Mol Biol 363(2):332-44
Ge D, et al.  (2005) RNase III-mediated silencing of a glucose-dependent repressor in yeast. Curr Biol 15(2):140-5
Ghazal G, et al.  (2005) Genome-wide prediction and analysis of yeast RNase III-dependent snoRNA processing signals. Mol Cell Biol 25(8):2981-94
Henras AK, et al.  (2005) Biochemical and genomic analysis of substrate recognition by the double-stranded RNA binding domain of yeast RNase III. RNA 11(8):1225-37
Sam M, et al.  (2005) A conserved major groove antideterminant for Saccharomyces cerevisiae RNase III recognition. Biochemistry 44(11):4181-7
Zer C and Chanfreau G  (2005) Regulation and surveillance of normal and 3'-extended forms of the yeast aci-reductone dioxygenase mRNA by RNase III cleavage and exonucleolytic degradation. J Biol Chem 280(32):28997-9003
Henras AK, et al.  (2004) A cotranscriptional model for 3'-end processing of the Saccharomyces cerevisiae pre-ribosomal RNA precursor. RNA 10(10):1572-85
Lamontagne B and Elela SA  (2004) Evaluation of the RNA determinants for bacterial and yeast RNase III binding and cleavage. J Biol Chem 279(3):2231-41
Lamontagne B, et al.  (2004) Molecular requirements for duplex recognition and cleavage by eukaryotic RNase III: discovery of an RNA-dependent DNA cleavage activity of yeast Rnt1p. J Mol Biol 338(2):401-18
Leulliot N, et al.  (2004) A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III. EMBO J 23(13):2468-77
Wu H, et al.  (2004) Structural basis for recognition of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III. Proc Natl Acad Sci U S A 101(22):8307-12
Chanfreau G  (2003) Conservation of RNase III processing pathways and specificity in hemiascomycetes. Eukaryot Cell 2(5):901-9
Giorgi C, et al.  (2001) Release of U18 snoRNA from its host intron requires interaction of Nop1p with the Rnt1p endonuclease. EMBO J 20(23):6856-65
Lamontagne B and Elela SA  (2001) Purification and characterization of Saccharomyces cerevisiae Rnt1p nuclease. Methods Enzymol 342:159-67
Lebars I, et al.  (2001) Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing. EMBO J 20(24):7250-8
Wu H, et al.  (2001) A novel family of RNA tetraloop structure forms the recognition site for Saccharomyces cerevisiae RNase III. EMBO J 20(24):7240-9
Kufel J, et al.  (1999) Yeast Rnt1p is required for cleavage of the pre-ribosomal RNA in the 3' ETS but not the 5' ETS. RNA 5(7):909-17