SNR6/snR6 Literature Guide Help

Other names published for SNR6: U6, U6 snRNA, snR6

SNR6 - Strains/Constructs (33)

ReferenceOther Genes Addressed
Query CC and Konarska MM  (2012) CEF1/CDC5 alleles modulate transitions between catalytic conformations of the spliceosome. RNA 18(5):1001-13
Rasche N, et al.  (2012) Cwc2 and its human homologue RBM22 promote an active conformation of the spliceosome catalytic centre. EMBO J 31(6):1591-604
Perriman R and Ares M Jr  (2010) Invariant U2 snRNA nucleotides form a stem loop to recognize the intron early in splicing. Mol Cell 38(3):416-27
Frazer LN, et al.  (2009) Analysis of synthetic lethality reveals genetic interactions between the GTPase Snu114p and snRNAs in the catalytic core of the Saccharomyces cerevisiae spliceosome. Genetics 183(2):497-515-1SI-4SI
Guo Z, et al.  (2009) Single-molecule analysis of protein-free U2-U6 snRNAs. Nat Struct Mol Biol 16(11):1154-9
Luhtala N and Parker R  (2009) LSM1 over-expression in Saccharomyces cerevisiae depletes U6 snRNA levels. Nucleic Acids Res 37(16):5529-36
Mefford MA and Staley JP  (2009) Evidence that U2/U6 helix I promotes both catalytic steps of pre-mRNA splicing and rearranges in between these steps. RNA 15(7):1386-97
Liu L, et al.  (2007) Opposing classes of prp8 alleles modulate the transition between the catalytic steps of pre-mRNA splicing. Nat Struct Mol Biol 14(6):519-26
Smith DJ, et al.  (2007) trans-splicing to spliceosomal U2 snRNA suggests disruption of branch site-U2 pairing during pre-mRNA splicing. Mol Cell 26(6):883-90
Biswas D, et al.  (2006) Genetic interactions between Nhp6 and Gcn5 with Mot1 and the Ccr4-Not complex that regulate binding of TATA-binding protein in Saccharomyces cerevisiae. Genetics 172(2):837-49
Chen CH, et al.  (2006) Functional links between the Prp19-associated complex, U4/U6 biogenesis, and spliceosome recycling. RNA 12(5):765-74
Kadaba S, et al.  (2006) Nuclear RNA surveillance in Saccharomyces cerevisiae: Trf4p-dependent polyadenylation of nascent hypomethylated tRNA and an aberrant form of 5S rRNA. RNA 12(3):508-21
Konarska MM, et al.  (2006) Repositioning of the reaction intermediate within the catalytic center of the spliceosome. Mol Cell 21(4):543-53
McGrail JC, et al.  (2006) Mutation in the U2 snRNA influences exon interactions of U5 snRNA loop 1 during pre-mRNA splicing. EMBO J 25(16):3813-22
Turner IA, et al.  (2006) Dissection of Prp8 protein defines multiple interactions with crucial RNA sequences in the catalytic core of the spliceosome. RNA 12(3):375-86
Villa T and Guthrie C  (2005) The Isy1p component of the NineTeen complex interacts with the ATPase Prp16p to regulate the fidelity of pre-mRNA splicing. Genes Dev 19(16):1894-904
Eriksson P, et al.  (2004) TATA-binding protein mutants that are lethal in the absence of the Nhp6 high-mobility-group protein. Mol Cell Biol 24(14):6419-29
Kaiser MW, et al.  (2004) Position-dependent function of a B block promoter element implies a specialized chromatin structure on the S.cerevisiae U6 RNA gene, SNR6. Nucleic Acids Res 32(14):4297-305
Verdone L, et al.  (2004) Lsm proteins promote regeneration of pre-mRNA splicing activity. Curr Biol 14(16):1487-91
Olson BL and Siliciano PG  (2003) A diverse set of nuclear RNAs transfer between nuclei of yeast heterokaryons. Yeast 20(10):893-903
Sashital DG, et al.  (2003) Structural basis for a lethal mutation in U6 RNA. Biochemistry 42(6):1470-7
Ryan DE, et al.  (2002) The 5' and 3' domains of yeast U6 snRNA: Lsm proteins facilitate binding of Prp24 protein to the U6 telestem region. RNA 8(8):1011-33
Martin MP, et al.  (2001) A novel upstream RNA polymerase III promoter element becomes essential when the chromatin structure of the yeast U6 RNA gene is altered. Mol Cell Biol 21(19):6429-39
Shukla GC and Padgett RA  (2001) The intramolecular stem-loop structure of U6 snRNA can functionally replace the U6atac snRNA stem-loop. RNA 7(1):94-105
Chang JS and McPheeters DS  (2000) Identification of a U2/U6 helix la mutant that influences 3' splice site selection during nuclear pre-mRNA splicing. RNA 6(8):1120-30
Kwan S, et al.  (2000) Disruption of the 5' stem-loop of yeast U6 RNA induces trimethylguanosine capping of this RNA polymerase III transcript in vivo. RNA 6(12):1859-69
Yean SL, et al.  (2000) Metal-ion coordination by U6 small nuclear RNA contributes to catalysis in the spliceosome. Nature 408(6814):881-4
Yieh L, et al.  (2000) The Brf and TATA-binding protein subunits of the RNA polymerase III transcription factor IIIB mediate position-specific integration of the gypsy-like element, Ty3. J Biol Chem 275(38):29800-7
Collins CA and Guthrie C  (1999) Allele-specific genetic interactions between Prp8 and RNA active site residues suggest a function for Prp8 at the catalytic core of the spliceosome. Genes Dev 13(15):1970-82
Mayes AE, et al.  (1999) Characterization of Sm-like proteins in yeast and their association with U6 snRNA. EMBO J 18(15):4321-31