RAT1/YOR048C Literature Guide Help

Other names published for RAT1: HKE1, TAP1, XRN2, YOR048C

RAT1 - Strains/Constructs (48)

ReferenceOther Genes Addressed
Egecioglu DE, et al.  (2012) Quality control of MATa1 splicing and exon skipping by nuclear RNA degradation. Nucleic Acids Res 40(4):1787-96
Geisler S, et al.  (2012) Decapping of long noncoding RNAs regulates inducible genes. Mol Cell 45(3):279-91
Lavoie M, et al.  (2012) Regulation of conditional gene expression by coupled transcription repression and RNA degradation. Nucleic Acids Res 40(2):871-83
Pfeiffer V and Lingner J  (2012) TERRA Promotes Telomere Shortening through Exonuclease 1-Mediated Resection of Chromosome Ends. PLoS Genet 8(6):e1002747
Srividya I, et al.  (2012) Yeast transcription termination factor rtt103 functions in DNA damage response. PLoS One 7(2):e31288
Braglia P, et al.  (2011) Co-transcriptional RNA cleavage provides a failsafe termination mechanism for yeast RNA polymerase I. Nucleic Acids Res 39(4):1439-48
Meaux S, et al.  (2011) Reporter mRNAs cleaved by Rnt1p are exported and degraded in the cytoplasm. Nucleic Acids Res 39(21):9357-67
Sahasranaman A, et al.  (2011) Assembly of Saccharomyces cerevisiae 60S ribosomal subunits: role of factors required for 27S pre-rRNA processing.LID - 10.1038/emboj.2011.338 [doi] EMBO J ()
Jimeno-Gonzalez S, et al.  (2010) The Yeast 5'-3' Exonuclease Rat1p Functions during Transcription Elongation by RNA Polymerase II. Mol Cell 37(4):580-587
Mariconti L, et al.  (2010) Coupled RNA polymerase II transcription and 3' end formation with yeast whole-cell extracts. RNA 16(11):2205-17
Alberti S, et al.  (2009) A systematic survey identifies prions and illuminates sequence features of prionogenic proteins. Cell 137(1):146-58
Ghazal G, et al.  (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109
Holbein S, et al.  (2009) Cordycepin interferes with 3' end formation in yeast independently of its potential to terminate RNA chain elongation. RNA 15(5):837-49
Oeffinger M, et al.  (2009) Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA. Mol Cell 36(5):768-81
Rondon AG, et al.  (2009) Fail-safe transcriptional termination for protein-coding genes in S. cerevisiae. Mol Cell 36(1):88-98
Breslow DK, et al.  (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8
Chernyakov I, et al.  (2008) Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1. Genes Dev 22(10):1369-80
Ciais D, et al.  (2008) The mRNA encoding the yeast ARE-binding protein Cth2 is generated by a novel 3' processing pathway. Nucleic Acids Res 36(9):3075-84
El Hage A, et al.  (2008) Efficient termination of transcription by RNA polymerase I requires the 5' exonuclease Rat1 in yeast. Genes Dev 22(8):1069-81
Gonzalez-Aguilera C, et al.  (2008) The THP1-SAC3-SUS1-CDC31 complex works in transcription elongation-mRNA export preventing RNA-mediated genome instability. Mol Biol Cell 19(10):4310-8
Kawauchi J, et al.  (2008) Budding yeast RNA polymerases I and II employ parallel mechanisms of transcriptional termination. Genes Dev 22(8):1082-92
Luke B, et al.  (2008) The Rat1p 5' to 3' Exonuclease Degrades Telomeric Repeat-Containing RNA and Promotes Telomere Elongation in Saccharomyces cerevisiae. Mol Cell 32(4):465-77
Kim M, et al.  (2006) Distinct pathways for snoRNA and mRNA termination. Mol Cell 24(5):723-34
Luo W, et al.  (2006) The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo model. Genes Dev 20(8):954-65
Yu L, et al.  (2006) A survey of essential gene function in the yeast cell division cycle. Mol Biol Cell 17(11):4736-47
Burckin T, et al.  (2005) Exploring functional relationships between components of the gene expression machinery. Nat Struct Mol Biol 12(2):175-82
Fang F, et al.  (2005) Rat1p and Rai1p function with the nuclear exosome in the processing and degradation of rRNA precursors. RNA 11(10):1571-8
Lee A, et al.  (2005) Multiple RNA surveillance pathways limit aberrant expression of iron uptake mRNAs and prevent iron toxicity in S. cerevisiae. Mol Cell 19(1):39-51
Kim M, et al.  (2004) The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature 432(7016):517-22
Das B, et al.  (2003) Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae. Mol Cell Biol 23(16):5502-15