NMD2/YHR077C Literature Guide Help

Other names published for NMD2: IFS1, SUA1, UPF2, SUP111, YHR077C

NMD2 - Strains/Constructs (64)

ReferenceOther Genes Addressed
Kvas S, et al.  (2012) Loss of nonsense mediated decay suppresses mutations in Saccharomyces cerevisiae TRA1. BMC Genet 13(1):19
Risler JK, et al.  (2012) Host co-factors of the retrovirus-like transposon Ty1. Mob DNA 3(1):12
Zhyravleva GA and Gryzina VA  (2012) [The influence of UPF genes on the severity of SUP45 mutations]. Mol Biol (Mosk) 46(2):285-97
Addinall SG, et al.  (2011) Quantitative Fitness Analysis Shows That NMD Proteins and Many Other Protein Complexes Suppress or Enhance Distinct Telomere Cap Defects. PLoS Genet 7(4):e1001362
Chang HY, et al.  (2011) Genome-wide analysis to identify pathways affecting telomere-initiated senescence in budding yeast. G3 (Bethesda) 1(3):197-208
Swisher KD and Parker R  (2011) Interactions between Upf1 and the decapping factors Edc3 and Pat1 in Saccharomyces cerevisiae. PLoS One 6(10):e26547
Chalamcharla VR, et al.  (2010) Nuclear expression of a group II intron is consistent with spliceosomal intron ancestry. Genes Dev 24(8):827-36
Dutko JA, et al.  (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66
Ghosh S, et al.  (2010) Translational competence of ribosomes released from a premature termination codon is modulated by NMD factors. RNA 16(9):1832-47
Shabel'skaia SV and Zhuravleva GA  (2010) [Mutations of Sup35 gene cause defects of NMD] Mol Biol (Mosk) 44(1):51-9
Kuroha K, et al.  (2009) Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome. EMBO Rep 10(11):1265-71
[No authors listed]  (2009) [Search of genes influencing propagation of the prion-like antisuppressor determinant [ISP+] in yeast using insertion library] Mol Biol (Mosk) 43(3):392-9
Berretta J, et al.  (2008) A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae. Genes Dev 22(5):615-26
Sayani S, et al.  (2008) Widespread impact of nonsense-mediated mRNA decay on the yeast intronome. Mol Cell 31(3):360-70
Takahashi S, et al.  (2008) Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast. RNA 14(9):1950-8
Wu X and Jiang YW  (2008) Overproduction of non-translatable mRNA silences. The transcription of Ty1 retrotransposons in S. cerevisiae via functional inactivation of the nuclear cap-binding complex and subsequent hyperstimulation of the TORC1 pathway. Yeast 25(5):327-47
Zheng W, et al.  (2008) Nonsense-Mediated Decay of ash1 Nonsense Transcripts in Saccharomyces cerevisiae. Genetics 180(3):1391-405
Chabelskaya S, et al.  (2007) Inactivation of NMD increases viability of sup45 nonsense mutants in Saccharomyces cerevisiae. BMC Mol Biol 8:71
Johansson MJ, et al.  (2007) Association of yeast Upf1p with direct substrates of the NMD pathway. Proc Natl Acad Sci U S A 104(52):20872-7
Luke B, et al.  (2007) Saccharomyces cerevisiae Ebs1p is a putative ortholog of human Smg7 and promotes nonsense-mediated mRNA decay. Nucleic Acids Res 35(22):7688-97
Ford AS, et al.  (2006) Ebs1p, a negative regulator of gene expression controlled by the Upf proteins in the yeast Saccharomyces cerevisiae. Eukaryot Cell 5(2):301-12
Gatbonton T, et al.  (2006) Telomere length as a quantitative trait: genome-wide survey and genetic mapping of telomere length-control genes in yeast. PLoS Genet 2(3):e35
Sheth U and Parker R  (2006) Targeting of aberrant mRNAs to cytoplasmic processing bodies. Cell 125(6):1095-109
Wang W, et al.  (2006) Role for Upf2p phosphorylation in Saccharomyces cerevisiae nonsense-mediated mRNA decay. Mol Cell Biol 26(9):3390-400
Culbertson MR and Neeno-Eckwall E  (2005) Transcript selection and the recruitment of mRNA decay factors for NMD in Saccharomyces cerevisiae. RNA 11(9):1333-9
Muhlrad D and Parker R  (2005) The yeast EDC1 mRNA undergoes deadenylation-independent decapping stimulated by Not2p, Not4p, and Not5p. EMBO J 24(5):1033-45
Ono B, et al.  (2005) Suppression of termination mutations caused by defects of the NMD machinery in Saccharomyces cerevisiae. Genes Genet Syst 80(5):311-6
Ono B, et al.  (2005) The Saccharomyces cerevisiae ESU1 gene, which is responsible for enhancement of termination suppression, corresponds to the 3'-terminal half of GAL11. Yeast 22(11):895-906
Taylor R, et al.  (2005) Gene set coregulated by the Saccharomyces cerevisiae nonsense-mediated mRNA decay pathway. Eukaryot Cell 4(12):2066-77
Askree SH, et al.  (2004) A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length. Proc Natl Acad Sci U S A 101(23):8658-63