NAM7/YMR080C Literature Guide Help

Other names published for NAM7: IFS2, MOF4, UPF1, SUP113, ATP-dependent RNA helicase NAM7, YMR080C

NAM7 - Strains/Constructs (109)

ReferenceOther Genes Addressed
Kervestin S, et al.  (2012) Testing the faux-UTR model for NMD: analysis of Upf1p and Pab1p competition for binding to eRF3/Sup35p. Biochimie 94(7):1560-71
Kvas S, et al.  (2012) Loss of nonsense mediated decay suppresses mutations in Saccharomyces cerevisiae TRA1. BMC Genet 13(1):19
Ma Z, et al.  (2012) Multiple roles for the Ess1 prolyl isomerase in the RNA polymerase II transcription cycle. Mol Cell Biol 32(17):3594-607
Plass M, et al.  (2012) RNA secondary structure mediates alternative 3'ss selection in Saccharomyces cerevisiae. RNA 18(6):1103-15
Richardson R, et al.  (2012) Mass spectrometric identification of proteins that interact through specific domains of the poly(A) binding protein. Mol Genet Genomics 287(9):711-30
Risler JK, et al.  (2012) Host co-factors of the retrovirus-like transposon Ty1. Mob DNA 3(1):12
Wang Q and Wang L  (2012) Genetic incorporation of unnatural amino acids into proteins in yeast. Methods Mol Biol 794():199-213
Yun Y, et al.  (2012) A systematic study of gene expression variation at single-nucleotide resolution reveals widespread regulatory roles for uAUGs. Genome Res 22(6):1089-97
Zhyravleva GA and Gryzina VA  (2012) [The influence of UPF genes on the severity of SUP45 mutations]. Mol Biol (Mosk) 46(2):285-97
Addinall SG, et al.  (2011) Quantitative Fitness Analysis Shows That NMD Proteins and Many Other Protein Complexes Suppress or Enhance Distinct Telomere Cap Defects. PLoS Genet 7(4):e1001362
Belew AT, et al.  (2011) Endogenous ribosomal frameshift signals operate as mRNA destabilizing elements through at least two molecular pathways in yeast. Nucleic Acids Res 39(7):2799-808
Chang HY, et al.  (2011) Genome-wide analysis to identify pathways affecting telomere-initiated senescence in budding yeast. G3 (Bethesda) 1(3):197-208
Deliz-Aguirre R, et al.  (2011) Copper tolerance of Saccharomyces cerevisiae nonsense-mediated mRNA decay mutants. Curr Genet 57(6):421-30
Jung PP, et al.  (2011) Ploidy influences cellular responses to gross chromosomal rearrangements in Saccharomyces cerevisiae. BMC Genomics 12(1):331
Karijolich J and Yu YT  (2011) Converting nonsense codons into sense codons by targeted pseudouridylation. Nature 474(7351):395-8
Swisher KD and Parker R  (2011) Interactions between Upf1 and the decapping factors Edc3 and Pat1 in Saccharomyces cerevisiae. PLoS One 6(10):e26547
Ai HW, et al.  (2010) Genetically encoded alkenes in yeast. Angew Chem Int Ed Engl 49(5):935-7
Chalamcharla VR, et al.  (2010) Nuclear expression of a group II intron is consistent with spliceosomal intron ancestry. Genes Dev 24(8):827-36
Dong S, et al.  (2010) Degradation of YRA1 Pre-mRNA in the cytoplasm requires translational repression, multiple modular intronic elements, Edc3p, and Mex67p. PLoS Biol 8(4):e1000360
Dutko JA, et al.  (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66
Ghosh S, et al.  (2010) Translational competence of ribosomes released from a premature termination codon is modulated by NMD factors. RNA 16(9):1832-47
Hu W, et al.  (2010) Nonsense-mediated mRNA decapping occurs on polyribosomes in Saccharomyces cerevisiae. Nat Struct Mol Biol 17(2):244-7
Johansson MJ and Jacobson A  (2010) Nonsense-mediated mRNA decay maintains translational fidelity by limiting magnesium uptake. Genes Dev 24(14):1491-5
Shabel'skaia SV and Zhuravleva GA  (2010) [Mutations of Sup35 gene cause defects of NMD] Mol Biol (Mosk) 44(1):51-9
Cole SE, et al.  (2009) A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay. Mol Cell 34(4):440-50
Crotti LB and Horowitz DS  (2009) Exon sequences at the splice junctions affect splicing fidelity and alternative splicing. Proc Natl Acad Sci U S A 106(45):18954-9
Estrella LA, et al.  (2009) The shuttling protein Npl3 promotes translation termination accuracy in Saccharomyces cerevisiae. J Mol Biol 394(3):410-22
Fujii K, et al.  (2009) A role for ubiquitin in the clearance of nonfunctional rRNAs. Genes Dev 23(8):963-74
Ghazal G, et al.  (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109
Hu W, et al.  (2009) Co-translational mRNA decay in Saccharomyces cerevisiae. Nature 461(7261):225-9