DOA1/YKL213C Literature Guide Help

Other names published for DOA1: UFD3, ZZZ4, YKL213C

DOA1 - Strains/Constructs (37)

ReferenceOther Genes Addressed
Khmelinskii A, et al.  (2012) Tandem fluorescent protein timers for in vivo analysis of protein dynamics.LID - 10.1038/nbt.2281 [doi] Nat Biotechnol ()
Benitez EM, et al.  (2011) Yos9, a control protein for misfolded glycosylated and non-glycosylated proteins in ERAD. FEBS Lett 585(19):3015-9
Bohm S, et al.  (2011) Cellular functions of ufd2 and ufd3 in proteasomal protein degradation depend on cdc48 binding. Mol Cell Biol 31(7):1528-39
Hsieh MT and Chen RH  (2011) Cdc48 and Cofactors Npl4-Ufd1 Are Important for G1 Progression during Heat Stress by Maintaining Cell Wall Integrity in Saccharomyces cerevisiae. PLoS One 6(4):e18988
Jaenicke LA, et al.  (2011) Yos9p assists in the degradation of certain nonglycosylated proteins from the endoplasmic reticulum. Mol Biol Cell 22(16):2937-45
Piggott N, et al.  (2011) Genome-wide Fitness Profiles Reveal a Requirement for Autophagy During Yeast Fermentation. G3 (Bethesda) 1(5):353-67
Tran JR, et al.  (2011) A Cdc48p-associated factor modulates endoplasmic reticulum-associated degradation, cell stress, and ubiquitinated protein homeostasis. J Biol Chem 286(7):5744-55
Wang X, et al.  (2011) Intersection of the multivesicular body pathway and lipid homeostasis in RNA replication by a positive-strand RNA virus. J Virol 85(11):5494-503
Bhattacharya A, et al.  (2010) Why Dom34 Stimulates Growth of Cells with Defects of 40S Ribosomal Subunit Biosynthesis. Mol Cell Biol 30(23):5562-71
Krick R, et al.  (2010) Cdc48/p97 and Shp1/p47 regulate autophagosome biogenesis in concert with ubiquitin-like Atg8. J Cell Biol 190(6):965-73
Nishimasu R, et al.  (2010) Crystal Structure of a PFU-PUL Domain Pair of Saccharomyces Cerevisiae Doa1/Ufd3. Kobe J Med Sci 56(3):E125-39
Pashkova N, et al.  (2010) WD40 repeat propellers define a ubiquitin-binding domain that regulates turnover of F box proteins. Mol Cell 40(3):433-43
Qiu L, et al.  (2010) Structure and function of the PLAA/Ufd3-p97/Cdc48 complex. J Biol Chem 285(1):365-72
Zheng J, et al.  (2010) Epistatic relationships reveal the functional organization of yeast transcription factors. Mol Syst Biol 6():420
Morgan J, et al.  (2009) Altering sphingolipid metabolism in Saccharomyces cerevisiae cells lacking the amphiphysin ortholog Rvs161 reinitiates sugar transporter endocytosis. Eukaryot Cell 8(5):779-89
Zhao G, et al.  (2009) An Armadillo motif in Ufd3 interacts with Cdc48 and is involved in ubiquitin homeostasis and protein degradation. Proc Natl Acad Sci U S A 106(38):16197-202
Ren J, et al.  (2008) DOA1/UFD3 Plays a Role in Sorting Ubiquitinated Membrane Proteins into Multivesicular Bodies. J Biol Chem 283(31):21599-611
Brandina I, et al.  (2007) tRNA import into yeast mitochondria is regulated by the ubiquitin-proteasome system. FEBS Lett 581(22):4248-54
Mulder KW, et al.  (2007) Modulation of Ubc4p/Ubc5p-Mediated Stress Responses by the RING-Finger-Dependent Ubiquitin-Protein Ligase Not4p in Saccharomyces cerevisiae. Genetics 176(1):181-92
Lis ET and Romesberg FE  (2006) Role of Doa1 in the Saccharomyces cerevisiae DNA damage response. Mol Cell Biol 26(11):4122-33
Mullally JE, et al.  (2006) Doa1 is a Cdc48 adapter that possesses a novel ubiquitin binding domain. Mol Cell Biol 26(3):822-30
Rumpf S and Jentsch S  (2006) Functional division of substrate processing cofactors of the ubiquitin-selective Cdc48 chaperone. Mol Cell 21(2):261-9
Keogh MC, et al.  (2005) Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex. Cell 123(4):593-605
Decottignies A, et al.  (2004) Binding of Cdc48p to a ubiquitin-related UBX domain from novel yeast proteins involved in intracellular proteolysis and sporulation. Yeast 21(2):127-39
Tong AH, et al.  (2004) Global mapping of the yeast genetic interaction network. Science 303(5659):808-13
Huh WK, et al.  (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91
Kushner DB, et al.  (2003) Systematic, genome-wide identification of host genes affecting replication of a positive-strand RNA virus. Proc Natl Acad Sci U S A 100(26):15764-9
Chang M, et al.  (2002) A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage. Proc Natl Acad Sci U S A 99(26):16934-9
Hanway D, et al.  (2002) Previously uncharacterized genes in the UV- and MMS-induced DNA damage response in yeast. Proc Natl Acad Sci U S A 99(16):10605-10
Wilson TE  (2002) A genomics-based screen for yeast mutants with an altered recombination/end-joining repair ratio. Genetics 162(2):677-88