UBP3/YER151C Literature Guide Help

Other names published for UBP3: BLM3, YER151C

UBP3 - Strains/Constructs (45)

Results: 1 - 30 of 45 records
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ReferenceOther Genes Addressed
Aragon AD, et al.  (2012) Genomic analysis of Saccharomyces cerevisiae isolates that grow optimally with glucose as the sole carbon source. Electrophoresis 33(23):3514-20
Doherty KM, et al.  (2012) Loss of a 20S Proteasome Activator in Saccharomyces cerevisiae Downregulates Genes Important for Genomic Integrity, Increases DNA Damage, and Selectively Sensitizes Cells to Agents With Diverse Mechanisms of Action. G3 (Bethesda) 2(8):943-59
Hodgins-Davis A, et al.  (2012) Abundant gene-by-environment interactions in gene expression reaction norms to copper within Saccharomyces cerevisiae. Genome Biol Evol 4(11):1061-79
Pestov DG and Shcherbik N  (2012) Rapid cytoplasmic turnover of yeast ribosomes in response to rapamycin inhibition of TOR. Mol Cell Biol 32(11):2135-44
Poulsen JW, et al.  (2012) Comprehensive profiling of proteome changes upon sequential deletion of deubiquitylating enzymes. J Proteomics 75(13):3886-97
Yoshida S and Yokoyama A  (2012) Identification and characterization of genes related to the production of organic acids in yeast. J Biosci Bioeng 113(5):556-61
Schaefer JB and Morgan DO  (2011) Protein-linked ubiquitin chain structure restricts activity of deubiquitinating enzymes. J Biol Chem 286(52):45186-96
Sole C, et al.  (2011) Control of Ubp3 ubiquitin protease activity by the Hog1 SAPK modulates transcription upon osmostress.LID - 10.1038/emboj.2011.227 [doi] EMBO J ()
Chew BS, et al.  (2010) Transcriptional activation requires protection of the TATA-binding protein Tbp1 by the ubiquitin-specific protease Ubp3. Biochem J 431(3):391-9
Mao P and Smerdon MJ  (2010) Yeast deubiquitinase ubp3 interacts with the 26 s proteasome to facilitate rad4 degradation. J Biol Chem 285(48):37542-50
Ossareh-Nazari B, et al.  (2010) Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy. EMBO Rep 11(7):548-54
Theis JF, et al.  (2010) The DNA Damage Response Pathway Contributes to the Stability of Chromosome III Derivatives Lacking Efficient Replicators. PLoS Genet 6(12):e1001227
Zheng J, et al.  (2010) Epistatic relationships reveal the functional organization of yeast transcription factors. Mol Syst Biol 6():420
Curwin AJ, et al.  (2009) Phospholipid Transfer Protein Sec14 Is Required for Trafficking from Endosomes and Regulates Distinct trans-Golgi Export Pathways. J Biol Chem 284(11):7364-75
Fujii K, et al.  (2009) A role for ubiquitin in the clearance of nonfunctional rRNAs. Genes Dev 23(8):963-74
Gitler AD, et al.  (2009) Alpha-synuclein is part of a diverse and highly conserved interaction network that includes PARK9 and manganese toxicity. Nat Genet 41(3):308-15
Harreman M, et al.  (2009) Distinct ubiquitin ligases act sequentially for RNA polymerase II polyubiquitylation. Proc Natl Acad Sci U S A 106(49):20705-10
Wu H, et al.  (2009) Disruption of ubiquitin-related genes in laboratory yeast strains enhances ethanol production during sake brewing. J Biosci Bioeng 107(6):636-40
Kraft C and Peter M  (2008) Is the Rsp5 ubiquitin ligase involved in the regulation of ribophagy? Autophagy 4(6):838-40
Kraft C, et al.  (2008) Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease. Nat Cell Biol 10(5):602-10
Kvint K, et al.  (2008) Reversal of RNA Polymerase II Ubiquitylation by the Ubiquitin Protease Ubp3. Mol Cell 30(4):498-506
Ruotolo R, et al.  (2008) Membrane transporters and protein traffic networks differentially affecting metal tolerance: a genomic phenotyping study in yeast. Genome Biol 9(4):R67
Wang Y, et al.  (2008) Down-regulation of Pkc1-mediated Signaling by the Deubiquitinating Enzyme Ubp3. J Biol Chem 283(4):1954-61
Bilsland E, et al.  (2007) The Bre5/Ubp3 ubiquitin protease complex from budding yeast contributes to the cellular response to DNA damage. DNA Repair (Amst) 6(10):1471-84
Li K, et al.  (2007) Molecular basis for bre5 cofactor recognition by the ubp3 deubiquitylating enzyme. J Mol Biol 372(1):194-204
McCullock S, et al.  (2006) blm3-1 Is an Allele of UBP3, a Ubiquitin Protease that Appears to Act During Transcription of Damaged DNA. J Mol Biol 363(3):660-72
Baxter BK, et al.  (2005) Atg19p ubiquitination and the cytoplasm to vacuole trafficking pathway in yeast. J Biol Chem 280(47):39067-76
Li K, et al.  (2005) Structural basis for interaction between the Ubp3 deubiquitinating enzyme and its Bre5 cofactor. J Biol Chem 280(32):29176-85
Schmitz C, et al.  (2005) The deubiquitinating enzyme Ubp1 affects sorting of the ATP-binding cassette-transporter Ste6 in the endocytic pathway. Mol Biol Cell 16(3):1319-29
Serviene E, et al.  (2005) Genome-wide screen identifies host genes affecting viral RNA recombination. Proc Natl Acad Sci U S A 102(30):10545-50
Results: 1 - 30 of 45 records
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