SIR3/YLR442C Literature Guide Help

Other names published for SIR3: CMT1, MAR2, STE8, YLR442C

SIR3 - Regulatory Role (25)

ReferenceOther Genes Addressed
Zhang X, et al.  (2012) Functions of Protosilencers in the Formation and Maintenance of Heterochromatin in Saccharomyces cerevisiae. PLoS One 7(5):e37092
Li M, et al.  (2010) Thiamine Biosynthesis in Saccharomyces cerevisiae Is Regulated by the NAD+-Dependent Histone Deacetylase Hst1. Mol Cell Biol 30(13):3329-41
Johnson A, et al.  (2009) Reconstitution of heterochromatin-dependent transcriptional gene silencing. Mol Cell 35(6):769-81
Loney ER, et al.  (2009) Repressive and non-repressive chromatin at native telomeres in Saccharomyces cerevisiae. Epigenetics Chromatin 2(1):18
Marvin ME, et al.  (2009) The association of yKu with subtelomeric core X sequences prevents recombination involving telomeric sequences. Genetics 183(2):453-67, 1SI-13SI
Miele A, et al.  (2009) Yeast silent mating type loci form heterochromatic clusters through silencer protein-dependent long-range interactions. PLoS Genet 5(5):e1000478
Ratna P, et al.  (2009) Synergy of repression and silencing gradients along the chromosome. J Mol Biol 387(4):826-39
Sinha M, et al.  (2009) Recombinational repair within heterochromatin requires ATP-dependent chromatin remodeling. Cell 138(6):1109-21
Verzijlbergen KF, et al.  (2009) Multiple histone modifications in euchromatin promote heterochromatin formation by redundant mechanisms in Saccharomyces cerevisiae. BMC Mol Biol 10:76
Fingerman IM, et al.  (2007) A charge-based interaction between histone H4 and Dot1 is required for H3K79 methylation and telomere silencing: identification of a new trans-histone pathway. Genes Dev 21(16):2018-29
Mead J, et al.  (2007) Swapping the gene-specific and regional silencing specificities of the Hst1 and Sir2 histone deacetylases. Mol Cell Biol 27(7):2466-75
Connelly JJ, et al.  (2006) Structure and function of the Saccharomyces cerevisiae Sir3 BAH domain. Mol Cell Biol 26(8):3256-65
Yu H and Gerstein M  (2006) Genomic analysis of the hierarchical structure of regulatory networks. Proc Natl Acad Sci U S A 103(40):14724-31
Jacobson SJ, et al.  (2004) Functional analyses of chromatin modifications in yeast. Methods Enzymol 377:3-55
Ladurner AG, et al.  (2003) Bromodomains mediate an acetyl-histone encoded antisilencing function at heterochromatin boundaries. Mol Cell 11(2):365-76
Marchfelder U, et al.  (2003) SIR-dependent repression of non-telomeric genes in Saccharomyces cerevisiae? Yeast 20(9):797-801
Ai W, et al.  (2002) Regulation of subtelomeric silencing during stress response. Mol Cell 10(6):1295-305
Hoppe GJ, et al.  (2002) Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation. Mol Cell Biol 22(12):4167-80
Bennett CB, et al.  (2001) SIR functions are required for the toleration of an unrepaired double-strand break in a dispensable yeast chromosome. Mol Cell Biol 21(16):5359-73
Pryde FE and Louis EJ  (1999) Limitations of silencing at native yeast telomeres. EMBO J 18(9):2538-50
Sekinger EA and Gross DS  (1999) SIR repression of a yeast heat shock gene: UAS and TATA footprints persist within heterochromatin. EMBO J 18(24):7041-55
Wyrick JJ, et al.  (1999) Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast. Nature 402(6760):418-21
Nasmyth KA  (1982) The regulation of yeast mating-type chromatin structure by SIR: an action at a distance affecting both transcription and transposition. Cell 30(2):567-78
Haber JE, et al.  (1981) Transposition of yeast mating type genes from two translocations of the left arm of chromosome III. Mol Cell Biol 1(12):1106-19
Haber JE and George JP  (1979) A mutation that permits the expression of normally silent copies of mating-type information in Saccharomyces cerevisiae. Genetics 93(1):13-35