PHO4/YFR034C Literature Guide Help

Other names published for PHO4: phoD, YFR034C

PHO4 - Regulatory Role (61)

Results: 1 - 30 of 61 records
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ReferenceOther Genes Addressed
He Y, et al.  (2012) Transcription regulation of the Saccharomyces cerevisiae PHO5 gene by the Ino2p and Ino4p basic helix-loop-helix proteins. Mol Microbiol 83(2):395-407
Raveh-Sadka T, et al.  (2012) Manipulating nucleosome disfavoring sequences allows fine-tune regulation of gene expression in yeast.LID - 10.1038/ng.2305 [doi] Nat Genet ()
Ghillebert R, et al.  (2011) Differential roles for the low-affinity phosphate transporters Pho87 and Pho90 in Saccharomyces cerevisiae. Biochem J 434(2):243-51
Mao C, et al.  (2011) Occlusion of regulatory sequences by promoter nucleosomes in vivo. PLoS One 6(3):e17521
Chen L and Lopes JM  (2010) Multiple bHLH proteins regulate CIT2 expression in Saccharomyces cerevisiae. Yeast 27(6):345-59
Ertel F, et al.  (2010) In Vitro Reconstitution of PHO5 Promoter Chromatin Remodeling Points to a Role for Activator-Nucleosome Competition In Vivo. Mol Cell Biol 30(16):4060-76
Nishizawa M, et al.  (2010) Pho85 Kinase, a Cyclin-Dependent Kinase, Regulates Nuclear Accumulation of the Rim101 Transcription Factor in the Stress Response of Saccharomyces cerevisiae. Eukaryot Cell 9(6):943-51
Pinson B, et al.  (2009) Metabolic intermediates selectively stimulate transcription factor interaction and modulate phosphate and purine pathways. Genes Dev 23(12):1399-407
Pondugula S, et al.  (2009) Coupling phosphate homeostasis to cell cycle-specific transcription: mitotic activation of Saccharomyces cerevisiae PHO5 by Mcm1 and Forkhead proteins. Mol Cell Biol 29(18):4891-905
Ransom M, et al.  (2009) FACT and the Proteasome Promote Promoter Chromatin Disassembly and Transcriptional Initiation. J Biol Chem 284(35):23461-71
Wang Y, et al.  (2009) Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data. Nucleic Acids Res 37(18):5943-58
Wippo CJ, et al.  (2009) Differential cofactor requirements for histone eviction from two nucleosomes at the yeast PHO84 promoter are determined by intrinsic nucleosome stability. Mol Cell Biol 29(11):2960-81
Kim HD and O'Shea EK  (2008) A quantitative model of transcription factor-activated gene expression. Nat Struct Mol Biol 15(11):1192-8
Lam FH, et al.  (2008) Chromatin decouples promoter threshold from dynamic range. Nature 453(7192):246-250
Nishizawa M, et al.  (2008) Nutrient-Regulated Antisense and Intragenic RNAs Modulate a Signal Transduction Pathway in Yeast. PLoS Biol 6(12):e326
Nishizawa M, et al.  (2008) Transcriptional repression by the Pho4 transcription factor controls the timing of SNZ1 expression. Eukaryot Cell 7(6):949-57
Zhao Y, et al.  (2008) Development of a Novel Oligonucleotide Array-Based Transcription Factor Assay Platform for Genome-Wide Active Transcription Factor Profiling in Saccharomyces cerevisiae. J Proteome Res 7(3):1315-1325
Adkins MW, et al.  (2007) Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators. Mol Cell Biol 27(18):6372-82
Chen M and Lopes JM  (2007) Multiple Basic Helix-Loop-Helix Proteins Regulate Expression of the ENO1 Gene of Saccharomyces cerevisiae. Eukaryot Cell 6(5):786-96
Maerkl SJ and Quake SR  (2007) A systems approach to measuring the binding energy landscapes of transcription factors. Science 315(5809):233-7
Chua G, et al.  (2006) Identifying transcription factor functions and targets by phenotypic activation. Proc Natl Acad Sci U S A 103(32):12045-50
Wu WS, et al.  (2006) Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle. BMC Bioinformatics 7(1):421
Yu H and Gerstein M  (2006) Genomic analysis of the hierarchical structure of regulatory networks. Proc Natl Acad Sci U S A 103(40):14724-31
Dhasarathy A and Kladde MP  (2005) Promoter occupancy is a major determinant of chromatin remodeling enzyme requirements. Mol Cell Biol 25(7):2698-707
Gardocki ME, et al.  (2005) Genomic analysis of PIS1 gene expression. Eukaryot Cell 4(3):604-14
Gonze D, et al.  (2005) Discrimination of yeast genes involved in methionine and phosphate metabolism on the basis of upstream motifs. Bioinformatics 21(17):3490-500
Siddharthan R, et al.  (2005) PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny. PLoS Comput Biol 1(7):e67
Almaguer C, et al.  (2004) Glycerophosphoinositol, a novel phosphate source whose transport is regulated by multiple factors in Saccharomyces cerevisiae. J Biol Chem 279(30):31937-42
Gunji W, et al.  (2004) Global analysis of the regulatory network structure of gene expression in Saccharomyces cerevisiae. DNA Res 11(3):163-77
Luscombe NM, et al.  (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431(7006):308-12
Results: 1 - 30 of 61 records
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