UBI4/YLL039C Literature Guide Help

Other names published for UBI4: SCD2, UB14, ubiquitin, YLL039C

UBI4 - Regulation of (41)

ReferenceOther Genes Addressed
Braten O, et al.  (2012) Generation of free ubiquitin chains is up-regulated in stress and facilitated by the HECT domain ubiquitin ligases UFD4 and HUL5. Biochem J 444(3):611-7
Patil A, et al.  (2012) Translational infidelity-induced protein stress results from a deficiency in Trm9-catalyzed tRNA modifications. RNA Biol 9(7):990-1001
Vizoso-Vazquez A, et al.  (2012) Ixr1p and the control of the Saccharomyces cerevisiae hypoxic response. Appl Microbiol Biotechnol 94(1):173-84
Becerra M, et al.  (2011) Comparative transcriptome analysis of yeast strains carrying slt2, rlm1, and pop2 deletions. Genome 54(2):99-109
Boender LG, et al.  (2011) Cellular responses of Saccharomyces cerevisiae at near-zero growth rates: transcriptome analysis of anaerobic retentostat cultures. FEMS Yeast Res 11(8):603-20
Dennissen FJ, et al.  (2011) Mutant ubiquitin (UBB+1) associated with neurodegenerative disorders is hydrolyzed by ubiquitin C-terminal hydrolase L3 (UCH-L3). FEBS Lett 585(16):2568-74
Fries T, et al.  (2011) The Saccharomyces cerevisiae ubiquitin E3 ligase Asr1p targets calmodulin for ubiquitylation. Biochem Biophys Res Commun 411(1):197-201
Minard LV, et al.  (2011) Transcriptional Regulation by Asf1: NEW MECHANISTIC INSIGHTS FROM STUDIES OF THE DNA DAMAGE RESPONSE TO REPLICATION STRESS. J Biol Chem 286(9):7082-92
Wang X, et al.  (2011) Intersection of the multivesicular body pathway and lipid homeostasis in RNA replication by a positive-strand RNA virus. J Virol 85(11):5494-503
Cheraiti N, et al.  (2008) Acetaldehyde addition throughout the growth phase alleviates the phenotypic effect of zinc deficiency in Saccharomyces cerevisiae. Appl Microbiol Biotechnol 77(5):1093-1109
Matiuhin Y, et al.  (2008) Extraproteasomal Rpn10 restricts access of the polyubiquitin-binding protein Dsk2 to proteasome. Mol Cell 32(3):415-25
Wu WS and Li WH  (2008) Identifying gene regulatory modules of heat shock response in yeast. BMC Genomics 9:439
[No authors listed]  (2008) [Rpn4p is a positive and negative transcriptional regulator of the ubiquitin-proteasome system] Mol Biol (Mosk) 42(3):518-25
Aragon AD, et al.  (2006) Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress. Genome Biol 7(2):R9
Buck MJ and Lieb JD  (2006) A chromatin-mediated mechanism for specification of conditional transcription factor targets. Nat Genet 38(12):1446-51
Eastmond DL and Nelson HC  (2006) Genome-wide analysis reveals new roles for the activation domains of the Saccharomyces cerevisiae heat shock transcription factor (Hsf1) during the transient heat shock response. J Biol Chem 281(43):32909-21
Matsumoto R, et al.  (2005) The stress response against denatured proteins in the deletion of cytosolic chaperones SSA1/2 is different from heat-shock response in Saccharomyces cerevisiae. BMC Genomics 6():141
Andalis AA, et al.  (2004) Defects arising from whole-genome duplications in Saccharomyces cerevisiae. Genetics 167(3):1109-21
Fujita K, et al.  (2004) Comprehensive gene expression analysis of the response to straight-chain alcohols in Saccharomyces cerevisiae using cDNA microarray. J Appl Microbiol 97(1):57-67
Hahn JS, et al.  (2004) Genome-wide analysis of the biology of stress responses through heat shock transcription factor. Mol Cell Biol 24(12):5249-56
London MK, et al.  (2004) Regulatory mechanisms controlling biogenesis of ubiquitin and the proteasome. FEBS Lett 567(2-3):259-64
Iwahashi H, et al.  (2003) Piezophysiology of genome wide gene expression levels in the yeast Saccharomyces cerevisiae. Extremophiles 7(4):291-8
Jones DL, et al.  (2003) Transcriptome profiling of a Saccharomyces cerevisiae mutant with a constitutively activated Ras/cAMP pathway. Physiol Genomics 16(1):107-18
Hofmann RM and Pickart CM  (2001) In vitro assembly and recognition of Lys-63 polyubiquitin chains. J Biol Chem 276(30):27936-43
Chung N, et al.  (2000) Sphingolipids signal heat stress-induced ubiquitin-dependent proteolysis. J Biol Chem 275(23):17229-32
Jelinsky SA and Samson LD  (1999) Global response of Saccharomyces cerevisiae to an alkylating agent. Proc Natl Acad Sci U S A 96(4):1486-91
Simon JR, et al.  (1999) Multiple independent regulatory pathways control UBI4 expression after heat shock in Saccharomyces cerevisiae. Mol Microbiol 31(3):823-32
Swaminathan S, et al.  (1999) The Doa4 deubiquitinating enzyme is required for ubiquitin homeostasis in yeast. Mol Biol Cell 10(8):2583-94
Gray NS, et al.  (1998) Exploiting chemical libraries, structure, and genomics in the search for kinase inhibitors. Science 281(5376):533-8
Treger JM, et al.  (1998) Transcriptional factor mutations reveal regulatory complexities of heat shock and newly identified stress genes in Saccharomyces cerevisiae. J Biol Chem 273(41):26875-9