SER3/YER081W Literature Guide Help

Other names published for SER3: phosphoglycerate dehydrogenase SER3, YER081W

SER3 - Regulation of (21)

ReferenceOther Genes Addressed
Hainer SJ, et al.  (2012) Identification of Mutant Versions of the Spt16 Histone Chaperone That Are Defective for Transcription-Coupled Nucleosome Occupancy in Saccharomyces cerevisiae. G3 (Bethesda) 2(5):555-67
Llopis S, et al.  (2012) Transcriptomics in human blood incubation reveals the importance of oxidative stress response in Saccharomyces cerevisiae clinical strains. BMC Genomics 13(1):419
Danford T, et al.  (2011) Discovering regulatory overlapping RNA transcripts. J Comput Biol 18(3):295-303
Hainer SJ and Martens JA  (2011) Identification of histone mutants that are defective for transcription-coupled nucleosome occupancy. Mol Cell Biol 31(17):3557-68
Hainer SJ, et al.  (2011) Intergenic transcription causes repression by directing nucleosome assembly. Genes Dev 25(1):29-40
Pruneski JA, et al.  (2011) The Paf1 complex represses SER3 transcription in Saccharomyces cerevisiae by facilitating intergenic transcription-dependent nucleosome occupancy of the SER3 promoter. Eukaryot Cell 10(10):1283-94
Thebault P, et al.  (2011) Transcription regulation by the noncoding RNA SRG1 requires Spt2-dependent chromatin deposition in the wake of RNA polymerase II. Mol Cell Biol 31(6):1288-300
Jacquier A  (2009) The complex eukaryotic transcriptome: unexpected pervasive transcription and novel small RNAs. Nat Rev Genet 10(12):833-844
Kennedy CJ, et al.  (2009) Systems-level engineering of nonfermentative metabolism in yeast. Genetics 183(1):385-97
Dikicioglu D, et al.  (2008) Integration of metabolic modeling and phenotypic data in evaluation and improvement of ethanol production using respiration-deficient mutants of Saccharomyces cerevisiae. Appl Environ Microbiol 74(18):5809-16
Lu P, et al.  (2007) Global metabolic changes following loss of a feedback loop reveal dynamic steady states of the yeast metabolome. Metab Eng 9(1):8-20
Thompson DM and Parker R  (2007) Cytoplasmic decay of intergenic transcripts in Saccharomyces cerevisiae. Mol Cell Biol 27(1):92-101
de Groot MJ, et al.  (2007) Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes. Microbiology 153(Pt 11):3864-3878
Nourani A, et al.  (2006) Evidence that Spt2/Sin1, an HMG-like factor, plays roles in transcription elongation, chromatin structure, and genome stability in Saccharomyces cerevisiae. Mol Cell Biol 26(4):1496-509
Lahue E, et al.  (2005) The Saccharomyces cerevisiae Sub2 protein suppresses heterochromatic silencing at telomeres and subtelomeric genes. Yeast 22(7):537-51
Martens JA, et al.  (2005) Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae. Genes Dev 19(22):2695-704
Haugen AC, et al.  (2004) Integrating phenotypic and expression profiles to map arsenic-response networks. Genome Biol 5(12):R95
Martens JA, et al.  (2004) Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene. Nature 429(6991):571-4
Albers E, et al.  (2003) Ser3p (Yer081wp) and Ser33p (Yil074cp) are phosphoglycerate dehydrogenases in Saccharomyces cerevisiae. J Biol Chem 278(12):10264-72
Rubin-Bejerano I, et al.  (2003) Phagocytosis by neutrophils induces an amino acid deprivation response in Saccharomyces cerevisiae and Candida albicans. Proc Natl Acad Sci U S A 100(19):11007-12
Martens JA and Winston F  (2002) Evidence that Swi/Snf directly represses transcription in S. cerevisiae. Genes Dev 16(17):2231-6