RPB4/YJL140W Literature Guide Help

Other names published for RPB4: CTF15, B32, YJL140W

RPB4 - Protein/Nucleic Acid Structure (43)

ReferenceOther Genes Addressed
Cai G, et al.  (2012) Interaction of the mediator head module with RNA polymerase II. Structure 20(5):899-910
Larson MH, et al.  (2012) Trigger loop dynamics mediate the balance between the transcriptional fidelity and speed of RNA polymerase II. Proc Natl Acad Sci U S A 109(17):6555-60
Luo J, et al.  (2012) An integrated chemical cross-linking and mass spectrometry approach to study protein complex architecture and function. Mol Cell Proteomics 11(2):M111.008318
Cheung AC and Cramer P  (2011) Structural basis of RNA polymerase II backtracking, arrest and reactivation. Nature 471(7337):249-53
Cheung AC, et al.  (2011) Structural basis of initial RNA polymerase II transcription. EMBO J 30(23):4755-63
Liu X, et al.  (2011) Initiation complex structure and promoter proofreading. Science 333(6042):633-7
Ruan W, et al.  (2011) Evolution of two modes of intrinsic RNA polymerase transcript cleavage. J Biol Chem 286(21):18701-7
Chen ZA, et al.  (2010) Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry. EMBO J 29(4):717-26
Liu X, et al.  (2010) Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism. Science 327(5962):206-9
Suh MH, et al.  (2010) A dual interface determines the recognition of RNA polymerase II by RNA capping enzyme. J Biol Chem 285(44):34027-38
Damsma GE and Cramer P  (2009) Molecular basis of transcriptional mutagenesis at 8-oxoguanine. J Biol Chem 284(46):31658-63
Kostrewa D, et al.  (2009) RNA polymerase II-TFIIB structure and mechanism of transcription initiation. Nature 462(7271):323-30
Meyer PA, et al.  (2009) Structure of the 12-subunit RNA polymerase II refined with the aid of anomalous diffraction data. J Biol Chem 284(19):12933-9
Spahr H, et al.  (2009) Schizosacharomyces pombe RNA polymerase II at 3.6-A resolution. Proc Natl Acad Sci U S A 106(23):9185-90
Brueckner F and Cramer P  (2008) Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation. Nat Struct Mol Biol 15(8):811-8
Cramer P, et al.  (2008) Structure of eukaryotic RNA polymerases. Annu Rev Biophys 37():337-52
Jung J, et al.  (2008) A Novel Approach to Investigating Protein/Protein Interactions and Their Functions by TAP-tagged Yeast Strains and its Application to Examine Yeast Transcription Machinery. J Microbiol Biotechnol 18(4):631-8
Mohammed S, et al.  (2008) Multiplexed proteomics mapping of yeast RNA polymerase II and III allows near-complete sequence coverage and reveals several novel phosphorylation sites. Anal Chem 80(10):3584-92
Brueckner F, et al.  (2007) CPD damage recognition by transcribing RNA polymerase II. Science 315(5813):859-62
Damsma GE, et al.  (2007) Mechanism of transcriptional stalling at cisplatin-damaged DNA. Nat Struct Mol Biol 14(12):1127-33
Fernandez-Tornero C, et al.  (2007) Insights into Transcription Initiation and Termination from the Electron Microscopy Structure of Yeast RNA Polymerase III. Mol Cell 25(6):813-23
Lehmann E, et al.  (2007) Molecular basis of RNA-dependent RNA polymerase II activity. Nature 450(7168):445-9
Kettenberger H, et al.  (2006) Structure of an RNA polymerase II-RNA inhibitor complex elucidates transcription regulation by noncoding RNAs. Nat Struct Mol Biol 13(1):44-8
Armache KJ, et al.  (2005) Structures of complete RNA polymerase II and its subcomplex, Rpb4/7. J Biol Chem 280(8):7131-4
Sareen A, et al.  (2005) Mapping the interaction site of Rpb4 and Rpb7 subunits of RNA polymerase II in Saccharomyces cerevisiae. Biochem Biophys Res Commun 332(3):763-70
Aloy P, et al.  (2004) Structure-based assembly of protein complexes in yeast. Science 303(5666):2026-9
Bushnell DA, et al.  (2004) Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms. Science 303(5660):983-8
Cramer P  (2004) RNA polymerase II structure: from core to functional complexes. Curr Opin Genet Dev 14(2):218-26
Kettenberger H, et al.  (2004) Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol Cell 16(6):955-65
Armache KJ, et al.  (2003) Architecture of initiation-competent 12-subunit RNA polymerase II. Proc Natl Acad Sci U S A 100(12):6964-8