RPB4/YJL140W Literature Guide Help

Other names published for RPB4: CTF15, B32, YJL140W

RPB4 - Protein-protein Interactions (63)

ReferenceOther Genes Addressed
Cai G, et al.  (2012) Interaction of the mediator head module with RNA polymerase II. Structure 20(5):899-910
Luo J, et al.  (2012) An integrated chemical cross-linking and mass spectrometry approach to study protein complex architecture and function. Mol Cell Proteomics 11(2):M111.008318
Smolle M, et al.  (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange. Nat Struct Mol Biol 19(9):884-92
Bintu L, et al.  (2011) The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.LID - 10.1038/nsmb.2164 [doi] Nat Struct Mol Biol ()
Czeko E, et al.  (2011) Iwr1 Directs RNA Polymerase II Nuclear Import. Mol Cell 42(2):261-6
Mosley AL, et al.  (2011) Highly reproducible label free quantitative proteomic analysis of RNA polymerase complexes. Mol Cell Proteomics 10(2):M110.000687
Shalem O, et al.  (2011) Transcriptome Kinetics Is Governed by a Genome-Wide Coupling of mRNA Production and Degradation: A Role for RNA Pol II. PLoS Genet 7(9):e1002273
Cai G, et al.  (2010) Mediator Head module structure and functional interactions. Nat Struct Mol Biol 17(3):273-9
Chen ZA, et al.  (2010) Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry. EMBO J 29(4):717-26
Chin CH, et al.  (2010) A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles. BMC Bioinformatics 11 Suppl 1():S25
Harel-Sharvit L, et al.  (2010) RNA Polymerase II Subunits Link Transcription and mRNA Decay to Translation. Cell 143(4):552-63
Pujari V, et al.  (2010) The Transcription Factor Spn1 Regulates Gene Expression via a Highly Conserved Novel Structural Motif. J Mol Biol 404(1):1-15
Suh MH, et al.  (2010) A dual interface determines the recognition of RNA polymerase II by RNA capping enzyme. J Biol Chem 285(44):34027-38
Kostrewa D, et al.  (2009) RNA polymerase II-TFIIB structure and mechanism of transcription initiation. Nature 462(7271):323-30
Mosley AL, et al.  (2009) Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation. Mol Cell 34(2):168-78
Daulny A, et al.  (2008) Modulation of RNA polymerase II subunit composition by ubiquitylation. Proc Natl Acad Sci U S A 105(50):19649-54
Goler-Baron V, et al.  (2008) Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes. Genes Dev 22(15):2022-7
Pascual-Garcia P, et al.  (2008) Sus1 is recruited to coding regions and functions during transcription elongation in association with SAGA and TREX2. Genes Dev 22(20):2811-22
Runner VM, et al.  (2008) The Rpb4 subunit of RNA polymerase II contributes to cotranscriptional recruitment of 3' processing factors. Mol Cell Biol 28(6):1883-91
Sampath V, et al.  (2008) Unstructured N Terminus of the RNA Polymerase II Subunit Rpb4 Contributes to the Interaction of Rpb4{middle dot}Rpb7 Subcomplex with the Core RNA Polymerase II of Saccharomyces cerevisiae. J Biol Chem 283(7):3923-31
Xue X and Lehming N  (2008) Nhp6p and Med3p regulate gene expression by controlling the local subunit composition of RNA polymerase II. J Mol Biol 379(2):212-30
Zhang L, et al.  (2008) Spn1 regulates the recruitment of Spt6 and the Swi/Snf complex during transcriptional activation by RNA polymerase II. Mol Cell Biol 28(4):1393-403
Max T, et al.  (2007) Hyperphosphorylation of the C-terminal repeat domain of RNA polymerase II facilitates dissociation of its complex with mediator. J Biol Chem 282(19):14113-20
Singh SR, et al.  (2007) Relative levels of RNA polII subunits differentially affect starvation response in budding yeast. Biochem Biophys Res Commun 356(1):266-72
Tardiff DF, et al.  (2007) Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking. Proc Natl Acad Sci U S A 104(50):19948-53
Krogan NJ, et al.  (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature 440(7084):637-43
Selitrennik M, et al.  (2006) Nucleocytoplasmic Shuttling of the Rpb4p and Rpb7p Subunits of Saccharomyces cerevisiae RNA Polymerase II by Two Pathways. Eukaryot Cell 5(12):2092-103
Wu X, et al.  (2006) Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations. Nucleic Acids Res 34(7):2137-50
Gingras AC, et al.  (2005) A novel, evolutionarily conserved protein phosphatase complex involved in cisplatin sensitivity. Mol Cell Proteomics 4(11):1725-40
Lotan R, et al.  (2005) The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs. Genes Dev 19(24):3004-16