RPB11/YOL005C Literature Guide Help

Other names published for RPB11: B12.5, YOL005C

RPB11 - Protein-protein Interactions (35)

ReferenceOther Genes Addressed
Cai G, et al.  (2012) Interaction of the mediator head module with RNA polymerase II. Structure 20(5):899-910
Luo J, et al.  (2012) An integrated chemical cross-linking and mass spectrometry approach to study protein complex architecture and function. Mol Cell Proteomics 11(2):M111.008318
Smolle M, et al.  (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange. Nat Struct Mol Biol 19(9):884-92
Bintu L, et al.  (2011) The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.LID - 10.1038/nsmb.2164 [doi] Nat Struct Mol Biol ()
Mosley AL, et al.  (2011) Highly reproducible label free quantitative proteomic analysis of RNA polymerase complexes. Mol Cell Proteomics 10(2):M110.000687
Chen ZA, et al.  (2010) Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry. EMBO J 29(4):717-26
Chin CH, et al.  (2010) A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles. BMC Bioinformatics 11 Suppl 1():S25
Pujari V, et al.  (2010) The Transcription Factor Spn1 Regulates Gene Expression via a Highly Conserved Novel Structural Motif. J Mol Biol 404(1):1-15
Suh MH, et al.  (2010) A dual interface determines the recognition of RNA polymerase II by RNA capping enzyme. J Biol Chem 285(44):34027-38
Kostrewa D, et al.  (2009) RNA polymerase II-TFIIB structure and mechanism of transcription initiation. Nature 462(7271):323-30
Mosley AL, et al.  (2009) Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation. Mol Cell 34(2):168-78
Proshkina GM and Shpakovskii GV  (2009) [The functional interaction of an RNA polymerase II Rpb11 subunit with the Med18 subunit (Srb5) of the Saccharomyces cerevisiae mediator complex] Bioorg Khim 35(4):572-6
Daulny A, et al.  (2008) Modulation of RNA polymerase II subunit composition by ubiquitylation. Proc Natl Acad Sci U S A 105(50):19649-54
Pascual-Garcia P, et al.  (2008) Sus1 is recruited to coding regions and functions during transcription elongation in association with SAGA and TREX2. Genes Dev 22(20):2811-22
Zhang L, et al.  (2008) Spn1 regulates the recruitment of Spt6 and the Swi/Snf complex during transcriptional activation by RNA polymerase II. Mol Cell Biol 28(4):1393-403
Lim MK, et al.  (2007) Gal11p dosage-compensates transcriptional activator deletions via Taf14p. J Mol Biol 374(1):9-23
Max T, et al.  (2007) Hyperphosphorylation of the C-terminal repeat domain of RNA polymerase II facilitates dissociation of its complex with mediator. J Biol Chem 282(19):14113-20
Tardiff DF, et al.  (2007) Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking. Proc Natl Acad Sci U S A 104(50):19948-53
Wu X, et al.  (2006) Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations. Nucleic Acids Res 34(7):2137-50
Benga WJ, et al.  (2005) Distinct regions of RPB11 are required for heterodimerization with RPB3 in human and yeast RNA polymerase II. Nucleic Acids Res 33(11):3582-90
Suh MH, et al.  (2005) An agarose-acrylamide composite native gel system suitable for separating ultra-large protein complexes. Anal Biochem 343(1):166-75
Suh MH, et al.  (2005) Fcp1 directly recognizes the C-terminal domain (CTD) and interacts with a site on RNA polymerase II distinct from the CTD. Proc Natl Acad Sci U S A 102(48):17314-9
Kamenski T, et al.  (2004) Structure and mechanism of RNA polymerase II CTD phosphatases. Mol Cell 15(3):399-407
Kettenberger H, et al.  (2004) Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol Cell 16(6):955-65
Rani PG, et al.  (2004) RNA polymerase II (Pol II)-TFIIF and Pol II-mediator complexes: the major stable Pol II complexes and their activity in transcription initiation and reinitiation. Mol Cell Biol 24(4):1709-20
Armache KJ, et al.  (2003) Architecture of initiation-competent 12-subunit RNA polymerase II. Proc Natl Acad Sci U S A 100(12):6964-8
Asturias FJ and Craighead JL  (2003) RNA polymerase II at initiation. Proc Natl Acad Sci U S A 100(12):6893-5
Chung WH, et al.  (2003) RNA polymerase II/TFIIF structure and conserved organization of the initiation complex. Mol Cell 12(4):1003-13
Davis JA, et al.  (2002) Structure of the yeast RNA polymerase II holoenzyme: Mediator conformation and polymerase interaction. Mol Cell 10(2):409-15
Krogan NJ, et al.  (2002) RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach. Mol Cell Biol 22(20):6979-92