RPB3/YIL021W Literature Guide Help

Other names published for RPB3: B44, YIL021W

RPB3 - Protein-protein Interactions (51)

ReferenceOther Genes Addressed
Luo J, et al.  (2012) An integrated chemical cross-linking and mass spectrometry approach to study protein complex architecture and function. Mol Cell Proteomics 11(2):M111.008318
Smolle M, et al.  (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange. Nat Struct Mol Biol 19(9):884-92
Bintu L, et al.  (2011) The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.LID - 10.1038/nsmb.2164 [doi] Nat Struct Mol Biol ()
Mosley AL, et al.  (2011) Highly reproducible label free quantitative proteomic analysis of RNA polymerase complexes. Mol Cell Proteomics 10(2):M110.000687
Soutourina J, et al.  (2011) Direct interaction of RNA polymerase II and mediator required for transcription in vivo. Science 331(6023):1451-4
Staresincic L, et al.  (2011) GTP-dependent binding and nuclear transport of RNA polymerase II by Npa3 protein. J Biol Chem 286(41):35553-61
Chen ZA, et al.  (2010) Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry. EMBO J 29(4):717-26
Chin CH, et al.  (2010) A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles. BMC Bioinformatics 11 Suppl 1():S25
Fernandez-Tornero C, et al.  (2010) Conformational flexibility of RNA polymerase III during transcriptional elongation. EMBO J 29(22):3762-3772
Govind CK, et al.  (2010) Phosphorylated Pol II CTD recruits multiple HDACs, including Rpd3C(S), for methylation-dependent deacetylation of ORF nucleosomes. Mol Cell 39(2):234-46
Malik S, et al.  (2010) Rad26p, a transcription-coupled repair factor, is recruited to the site of DNA lesion in an elongating RNA polymerase II-dependent manner in vivo. Nucleic Acids Res 38(5):1461-77
Pujari V, et al.  (2010) The Transcription Factor Spn1 Regulates Gene Expression via a Highly Conserved Novel Structural Motif. J Mol Biol 404(1):1-15
Suh MH, et al.  (2010) A dual interface determines the recognition of RNA polymerase II by RNA capping enzyme. J Biol Chem 285(44):34027-38
Kostrewa D, et al.  (2009) RNA polymerase II-TFIIB structure and mechanism of transcription initiation. Nature 462(7271):323-30
Mosley AL, et al.  (2009) Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation. Mol Cell 34(2):168-78
Takahashi H, et al.  (2009) Saccharomyces cerevisiae Med9 comprises two functionally distinct domains that play different roles in transcriptional regulation. Genes Cells 14(1):53-67
Daulny A, et al.  (2008) Modulation of RNA polymerase II subunit composition by ubiquitylation. Proc Natl Acad Sci U S A 105(50):19649-54
Nordick K, et al.  (2008) Direct interactions between the Paf1 complex and a cleavage and polyadenylation factor are revealed by dissociation of Paf1 from RNA polymerase II. Eukaryot Cell 7(7):1158-67
Pascual-Garcia P, et al.  (2008) Sus1 is recruited to coding regions and functions during transcription elongation in association with SAGA and TREX2. Genes Dev 22(20):2811-22
Zhang L, et al.  (2008) Spn1 regulates the recruitment of Spt6 and the Swi/Snf complex during transcriptional activation by RNA polymerase II. Mol Cell Biol 28(4):1393-403
Lim MK, et al.  (2007) Gal11p dosage-compensates transcriptional activator deletions via Taf14p. J Mol Biol 374(1):9-23
Max T, et al.  (2007) Hyperphosphorylation of the C-terminal repeat domain of RNA polymerase II facilitates dissociation of its complex with mediator. J Biol Chem 282(19):14113-20
Tardiff DF, et al.  (2007) Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking. Proc Natl Acad Sci U S A 104(50):19948-53
Jothi R, et al.  (2006) Co-evolutionary Analysis of Domains in Interacting Proteins Reveals Insights into Domain-Domain Interactions Mediating Protein-Protein Interactions. J Mol Biol 362(4):861-75
Krogan NJ, et al.  (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature 440(7084):637-43
Titz B, et al.  (2006) Transcriptional activators in yeast. Nucleic Acids Res 34(3):955-67
Wu X, et al.  (2006) Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations. Nucleic Acids Res 34(7):2137-50
Benga WJ, et al.  (2005) Distinct regions of RPB11 are required for heterodimerization with RPB3 in human and yeast RNA polymerase II. Nucleic Acids Res 33(11):3582-90
Gingras AC, et al.  (2005) A novel, evolutionarily conserved protein phosphatase complex involved in cisplatin sensitivity. Mol Cell Proteomics 4(11):1725-40
Suh MH, et al.  (2005) An agarose-acrylamide composite native gel system suitable for separating ultra-large protein complexes. Anal Biochem 343(1):166-75