YAP1/YML007W Literature Guide Help

Other names published for YAP1: PAR1, SNQ3, YML007W

YAP1 - Protein-Nucleic Acid Interactions (42)

ReferenceOther Genes Addressed
Gulshan K, et al.  (2012) Proteolytic degradation of the Yap1 transcription factor is regulated by subcellular localization and the E3 ubiquitin ligase Not4. J Biol Chem 287(32):26796-805
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Fordyce PM, et al.  (2010) De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis. Nat Biotechnol 28(9):970-5
Teixeira MC, et al.  (2010) Refining current knowledge on the yeast FLR1 regulatory network by combined experimental and computational approaches. Mol Biosyst 6(12):2471-81
Gordan R, et al.  (2009) Distinguishing direct versus indirect transcription factor-DNA interactions. Genome Res 19(11):2090-100
He XJ, et al.  (2009) Oxidative stress function of the Saccharomyces cerevisiae Skn7 receiver domain. Eukaryot Cell 8(5):768-78
Swamy KB, et al.  (2009) Impact of DNA-binding position variants on yeast gene expression. Nucleic Acids Res 37(21):6991-7001
Ye C, et al.  (2009) Using network component analysis to dissect regulatory networks mediated by transcription factors in yeast. PLoS Comput Biol 5(3):e1000311
Ilina Y, et al.  (2008) Characterization of the DNA-binding motif of the arsenic-responsive transcription factor Yap8p. Biochem J 415(3):467-75
Lu CC, et al.  (2008) Extracting transcription factor binding sites from unaligned gene sequences with statistical models. BMC Bioinformatics 9 Suppl 12:S7
Tan K, et al.  (2008) A systems approach to delineate functions of paralogous transcription factors: role of the Yap family in the DNA damage response. Proc Natl Acad Sci U S A 105(8):2934-9
Chua G, et al.  (2006) Identifying transcription factor functions and targets by phenotypic activation. Proc Natl Acad Sci U S A 103(32):12045-50
Ho SW, et al.  (2006) Linking DNA-binding proteins to their recognition sequences by using protein microarrays. Proc Natl Acad Sci U S A 103(26):9940-5
Workman CT, et al.  (2006) A systems approach to mapping DNA damage response pathways. Science 312(5776):1054-9
Zanton SJ and Pugh BF  (2006) Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock. Genes Dev 20(16):2250-65
Gulshan K, et al.  (2005) Oxidant-specific folding of Yap1p regulates both transcriptional activation and nuclear localization. J Biol Chem 280(49):40524-33
Wood MJ, et al.  (2003) The redox domain of the Yap1p transcription factor contains two disulfide bonds. Biochemistry 42(41):11982-91
Cohen BA, et al.  (2002) Discrimination between paralogs using microarray analysis: application to the Yap1p and Yap2p transcriptional networks. Mol Biol Cell 13(5):1608-14
Dormer UH, et al.  (2002) Oxidant regulation of the Saccharomyces cerevisiae GSH1 gene. Biochim Biophys Acta 1576(1-2):23-9
Jiao K, et al.  (2002) Phylogenetic footprinting reveals multiple regulatory elements involved in control of the meiotic recombination gene, REC102. Yeast 19(2):99-114
Owsianik G, et al.  (2002) Control of 26S proteasome expression by transcription factors regulating multidrug resistance in Saccharomyces cerevisiae. Mol Microbiol 43(5):1295-308
Toone WM, et al.  (2001) Redox control of AP-1-like factors in yeast and beyond. Oncogene 20(19):2336-46
Bourdineaud JP, et al.  (2000) A Rox1-independent hypoxic pathway in yeast. Antagonistic action of the repressor Ord1 and activator Yap1 for hypoxic expression of the SRP1/TIR1 gene. Mol Microbiol 38(4):879-90
Delneri D, et al.  (1999) Analysis of the seven-member AAD gene set demonstrates that genetic redundancy in yeast may be more apparent than real. Genetics 153(4):1591-600
Lee J, et al.  (1999) Yap1 and Skn7 control two specialized oxidative stress response regulons in yeast. J Biol Chem 274(23):16040-6
Vilela C, et al.  (1999) Post-termination ribosome interactions with the 5'UTR modulate yeast mRNA stability. EMBO J 18(11):3139-52
Coleman ST, et al.  (1997) Saccharomyces cerevisiae basic region-leucine zipper protein regulatory networks converge at the ATR1 structural gene. J Biol Chem 272(37):23224-30
Fernandes L, et al.  (1997) Yap, a novel family of eight bZIP proteins in Saccharomyces cerevisiae with distinct biological functions. Mol Cell Biol 17(12):6982-93
Kuge S, et al.  (1997) Regulation of yAP-1 nuclear localization in response to oxidative stress. EMBO J 16(7):1710-20
Bordallo J and Suarez-Rendueles P  (1995) Identification of regulatory proteins that might be involved in carbon catabolite repression of the aminopeptidase I gene of the yeast Saccharomyces cerevisiae. FEBS Lett 376(1-2):120-4